RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, human

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-229	ENST00000621897	UBL4A	P11441	157 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	KRT10	P13645	584 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	PAX1	P15863	534 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	HOXC9	P31274	260 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	UBA7	P41226	1012 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	AMPH	P49418	695 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	COG7	P83436	770 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	CEBPZ	Q03701	1054 aa	Known RBP	4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	GPR180	Q86V85	440 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	ARMC8	Q8IUR7	673 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	MAP7D3	Q8IWC1	876 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	THAP6	Q8TBB0	222 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	WBP2	Q969T9	261 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	MMAB	Q96EY8	250 aa	Predicted RBP	4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	NEUROD6	Q96NK8	337 aa		4.17	□□□□□ -1.74
BRCA1-229	ENST00000621897	NOTCH3	Q9UM47	2321 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897		A0A1W2PP11	408 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	EIF3D	O15371	548 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	KCNK5	O95279	499 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	MLYCD	O95822	493 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	IGHV4-39	P01824	125 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	COPB2	P35606	906 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	DCT	P40126	519 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	RGS2	P41220	211 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	HOXA1	P49639	335 aa	Predicted RBP	4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	MMP14	P50281	582 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	F2RL1	P55085	397 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	TMEM115	Q12893	351 aa	Predicted RBP	4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	FRG1	Q14331	258 aa	Known RBP	4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	C14orf177	Q52M58	125 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	KRTCAP3	Q53RY4	240 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	ARHGAP17	Q68EM7	881 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	DGLUCY	Q7Z3D6	616 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	SMAP1	Q8IYB5	467 aa	Predicted RBP	4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	GRAPL	Q8TC17	118 aa	Predicted RBP	4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	METTL6	Q8TCB7	284 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	PERP	Q96FX8	193 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	ST6GAL2	Q96JF0	529 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	ZNF354B	Q96LW1	612 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	F2RL3	Q96RI0	385 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897	STRA6	Q9BX79	667 aa		4.16	□□□□□ -1.74
BRCA1-229	ENST00000621897		A0A1W2PQF6	199 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	C5orf60	A6NFR6	353 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	EIF3CL	B5ME19	914 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	HS3ST1	O14792	307 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	ANKRD28	O15084	1053 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	KCNN4	O15554	427 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	SYNGR3	O43761	229 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	ZNF500	O60304	480 aa	Predicted RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	GM2A	P17900	193 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	UGT1A1	P22309	533 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	UBA1	P22314	1058 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	CALR	P27797	417 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	ARCN1	P48444	511 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	NR0B1	P51843	470 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	RARS	P54136	660 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	PLIN5	Q00G26	463 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	MAD2L1	Q13257	205 aa	Predicted RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	DCTN2	Q13561	401 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	MAPRE1	Q15691	268 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	ZNF704	Q6ZNC4	412 aa	Predicted RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	ADSSL1	Q8N142	457 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	RBM15B	Q8NDT2	890 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	OR10V1	Q8NGI7	309 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	FAM76A	Q8TAV0	307 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	INTS12	Q96CB8	462 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	TMEM68	Q96MH6	324 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	UBN1	Q9NPG3	1134 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	MAP3K20	Q9NYL2	800 aa	Known RBP	4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	TAS2R10	Q9NYW0	307 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	KLHL9	Q9P2J3	617 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	OR14J1	Q9UGF5	321 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	NRBP1	Q9UHY1	535 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	CLIC4	Q9Y696	253 aa		4.15	□□□□□ -1.75
BRCA1-229	ENST00000621897	IGLV5-45	A0A087WSX0	123 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	OR5K3	A6NET4	321 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	LDLR	P01130	860 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	PTMA	P06454	111 aa	Known RBP	4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	PATE4	P0C8F1	98 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	ATP1A3	P13637	1013 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	PBX3	P40426	434 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	TERF1	P54274	439 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	KRTAP10-12	P60413	245 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	OLR1	P78380	273 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	CDC16	Q13042	620 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	GAGE5	Q13069	117 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	GAGE6	Q13070	117 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	CCNYL2	Q5T2Q4	361 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	LCN10	Q6JVE6	187 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	ARHGAP11A	Q6P4F7	1023 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	PAPD4	Q6PIY7	484 aa	Known RBP	4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	GSTA5	Q7RTV2	222 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	R3HCC1L	Q7Z5L2	792 aa	Known RBP	4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	TSPYL6	Q8N831	410 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	WDSUB1	Q8N9V3	476 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	WBP1	Q96G27	269 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	HARBI1	Q96MB7	349 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	SMC6	Q96SB8	1091 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	LITAF	Q99732	161 aa		4.14	□□□□□ -1.75
BRCA1-229	ENST00000621897	LRMDA	Q9H2I8	198 aa		4.14	□□□□□ -1.75

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