RNA–Protein interactions for RNA: ENST00000609024.5

CHMP4A-211, Transcript of charged multivesicular body protein 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4A, Length 735 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-211ENST00000609024 SLC25A23Q9BV35 468 aa17.15■□□□□ 0.34
CHMP4A-211ENST00000609024 SLC29A3Q9BZD2 475 aa17.15■□□□□ 0.34
CHMP4A-211ENST00000609024 NT5MQ9NPB1 228 aa17.15■□□□□ 0.34
CHMP4A-211ENST00000609024 CASS4Q9NQ75 786 aa17.15■□□□□ 0.34
CHMP4A-211ENST00000609024 CREBBPQ92793 2442 aa17.15■□□□□ 0.34
CHMP4A-211ENST00000609024 RP1L1Q8IWN7 2480 aaPredicted RBP17.14■□□□□ 0.34
CHMP4A-211ENST00000609024 A0A0J9YYE9 177 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 LRCH4O75427 683 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 MTA2O94776 668 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 DDAH2O95865 285 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 RECKO95980 971 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 TRBC1P01850 177 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 FERP16591 822 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 SH3BP2P78314 561 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 SEMA5AQ13591 1074 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 DPYSQ14117 519 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 TMEM135Q86UB9 458 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 APLFQ8IW19 511 aaPredicted RBP17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 POLR1EQ9GZS1 481 aaKnown RBP17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 CLSTN2Q9H4D0 955 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 PDE7BQ9NP56 450 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 ACSS2Q9NR19 701 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 PKD2L2Q9NZM6 624 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 RCOR3Q9P2K3 495 aaPredicted RBP17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 TTLL3Q9Y4R7 772 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 PCDHGA6Q9Y5G7 932 aa17.14■□□□□ 0.33
CHMP4A-211ENST00000609024 C21orf140B9A014 251 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 GRID2O43424 1007 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 MAFKO60675 156 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 DNAJB5O75953 348 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 C9P02748 559 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 PDHA1P08559 390 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 AMPD1P23109 780 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 STC1P52823 247 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 RPS15P62841 145 aaKnown RBP17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 CCHCR1Q8TD31 782 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 THAP4Q8WY91 577 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 HSPH1Q92598 858 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 ZDHHC12Q96GR4 267 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 FAM83DQ9H4H8 585 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 ZNF768Q9H5H4 540 aaKnown RBP17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 UCK1Q9HA47 277 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 KLC4Q9NSK0 619 aa17.13■□□□□ 0.33
CHMP4A-211ENST00000609024 ATMINO43313 823 aaPredicted RBP17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 SEMA7AO75326 666 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 SPAG6O75602 509 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 CLDN7O95471 211 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 PEX11BO96011 259 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 ATP1A3P13637 1013 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 CES1P23141 567 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 CCL11P51671 97 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 PDE1BQ01064 536 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 UBXN1Q04323 297 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 INSCQ1MX18 579 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 CACHD1Q5VU97 1274 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 TMEM26Q6ZUK4 368 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 RAVER1Q8IY67 606 aaKnown RBP17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 CT55Q8WUE5 264 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 PLEKHG4BQ96PX9 1271 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 CARD9Q9H257 536 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 ACTL8Q9H568 366 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 LHX9Q9NQ69 397 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 SIK3Q9Y2K2 1263 aa17.12■□□□□ 0.33
CHMP4A-211ENST00000609024 C1orf232A0A0U1RR37 186 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 TMEM191CA6NGB0 347 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 PDZK1P1A8MUH7 402 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 PDGFAP04085 211 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 FGF5P12034 268 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 XRCC1P18887 633 aaPredicted RBP17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 VARSP26640 1264 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 ARL4DP49703 201 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 NADK2Q4G0N4 442 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 BOLA3Q53S33 107 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 TDRD12Q587J7 1177 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 ANKRD20A8PQ5CZ79 823 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 PLEKHA7Q6IQ23 1121 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 IRGCQ6NXR0 463 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 ARFGAP1Q8N6T3 406 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 LPCAT1Q8NF37 534 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 PRR7Q8TB68 274 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 ENOX1Q8TC92 643 aaKnown RBP17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 SMIM14Q96QK8 99 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 GPR87Q9BY21 358 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 NUP62CLQ9H1M0 184 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 SLAMF7Q9NQ25 335 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 RARRES3Q9UL19 164 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 CHKBQ9Y259 395 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 MAP4K5Q9Y4K4 846 aa17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 PCYT1BQ9Y5K3 369 aaPredicted RBP17.11■□□□□ 0.33
CHMP4A-211ENST00000609024 ARGFXA6NJG6 315 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 NUAK1O60285 661 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 FZD6O60353 706 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 LEPRP48357 1165 aaKnown RBP17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 UBE2IP63279 158 aaKnown RBP17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 SEPT7Q16181 437 aaKnown RBP17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 SMTNL2Q2TAL5 461 aa17.1■□□□□ 0.33
CHMP4A-211ENST00000609024 FAM92BQ6ZTR7 304 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms