RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 SLCO2A1Q92959 643 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 CDKN2AIPNLQ96HQ2 116 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 CNDP2Q96KP4 475 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 APOLD1Q96LR9 279 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 VPS35Q96QK1 796 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 OR2AG1Q9H205 316 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 SLC32A1Q9H598 525 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 TRIM39Q9HCM9 518 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 SPATS2LQ9NUQ6 558 aaKnown RBP14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 NLGN3Q9NZ94 848 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 SLC23A2Q9UGH3 650 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 SPTBN4Q9H254 2564 aa14.07□□□□□ -0.16
SHKBP1-217ENST00000598558 AGAP14A8MT82 685 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 NUAK1O60285 661 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 PPFIA2O75334 1257 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 SRP72O76094 671 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 PRAMEF1O95521 474 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 LDOC1O95751 146 aaPredicted RBP14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 CTSEP14091 401 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 MGAT1P26572 445 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 PAFAH1B1P43034 410 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 BLKP51451 505 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 CTBSQ01459 385 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 PTK6Q13882 451 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 GPRC6AQ5T6X5 926 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 TSTD2Q5T7W7 516 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 LRRC8BQ6P9F7 803 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 ZNF547Q8IVP9 402 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 PIANPQ8IYJ0 282 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 MPP5Q8N3R9 675 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 SPATA4Q8NEY3 305 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 OR13J1Q8NGT2 312 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 STYXQ8WUJ0 223 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 RANBP9Q96S59 729 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 KRT12Q99456 494 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 TRIM56Q9BRZ2 755 aaKnown RBP14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 TRIM51Q9BSJ1 452 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 CHRAC1Q9NRG0 131 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 VPS18Q9P253 973 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 RNF14Q9UBS8 474 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 GPSM3Q9Y4H4 160 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 CABIN1Q9Y6J0 2220 aa14.06□□□□□ -0.16
SHKBP1-217ENST00000598558 MED19A0JLT2 244 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 CCDC162PA2VCL2 907 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 NEMP2A6NFY4 417 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 GOLGA8MH3BSY2 632 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 H7C0S8 307 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 TPP1O14773 563 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 CHUKO15111 745 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 TP73O15350 636 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 TTI1O43156 1089 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 TNFSF14O43557 240 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 SGTAO43765 313 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 DKK1O94907 266 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 EML2O95834 649 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 FTH1P19P0C7X4 201 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 ADRA1DP25100 572 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 MC4RP32245 332 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 CTSCP53634 463 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 CDK16Q00536 496 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 B4GALNT1Q00973 533 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 ACVR1Q04771 509 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 C2orf54Q08AI8 447 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 TMEM115Q12893 351 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 ELOCQ15369 112 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 RNASEH2BQ5TBB1 312 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 ZDHHC20Q5W0Z9 365 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 OGFOD3Q6PK18 319 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 CES3Q6UWW8 571 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 TAF8Q7Z7C8 310 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 JAMLQ86YT9 394 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 SLC35F3Q8IY50 421 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 FSTL5Q8N475 847 aaPredicted RBP14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 RASGEF1AQ8N9B8 481 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 FAM181AQ8N9Y4 354 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 GRK7Q8WTQ7 553 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 HDAC10Q969S8 669 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 LRRC45Q96CN5 670 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 OR2M4Q96R27 311 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 CDC6Q99741 560 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 C19orf43Q9BQ61 176 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 BOCQ9BWV1 1114 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 ASB8Q9H765 288 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 TRNAU1APQ9NX07 287 aaKnown RBP14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 SYBUQ9NX95 663 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 FTSJ1Q9UET6 329 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 ZNHIT2Q9UHR6 403 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 TCAF1Q9Y4C2 921 aa14.05□□□□□ -0.16
SHKBP1-217ENST00000598558 TRBV5-4A0A0C4DH59 114 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 CCDC188H7C350 402 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 GRID2O43424 1007 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 NOBOXO60393 691 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 GAS8O95995 478 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 ANXA6P08133 673 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 NMBRP28336 390 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 NPY2RP49146 381 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 ACADVLP49748 655 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 CLDN6P56747 220 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 PDE1BQ01064 536 aa14.04□□□□□ -0.16
SHKBP1-217ENST00000598558 DR1Q01658 176 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms