RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 TMX2-CTNND1H3BSU7 103 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 KCNN4O15554 427 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 TLX3O43711 291 aaPredicted RBP12.92□□□□□ -0.34
USE1-207ENST00000596136 BRINP1O60477 761 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 PPFIA2O75334 1257 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 SLC25A14O95258 325 aaPredicted RBP12.92□□□□□ -0.34
USE1-207ENST00000596136 ECEL1O95672 775 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 AGTP01019 485 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 ACTR1BP42025 376 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 GPR3P46089 330 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 CLCNKAP51800 687 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 ACTR1AP61163 376 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 ZFP36L1Q07352 338 aaKnown RBP12.92□□□□□ -0.34
USE1-207ENST00000596136 TBC1D25Q3MII6 688 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 ZNF569Q5MCW4 686 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 SLC30A9Q6PML9 568 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 MARK2Q7KZI7 788 aaKnown RBP12.92□□□□□ -0.34
USE1-207ENST00000596136 CCNJLQ8IV13 435 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 LRRC8AQ8IWT6 810 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 PIAS4Q8N2W9 510 aaPredicted RBP12.92□□□□□ -0.34
USE1-207ENST00000596136 SLC25A41Q8N5S1 370 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 SLC35B2Q8TB61 432 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 FGF11Q92914 225 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 ATXN7L3BQ96GX2 97 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 LIN37Q96GY3 246 aaPredicted RBP12.92□□□□□ -0.34
USE1-207ENST00000596136 ZNF578Q96N58 590 aaPredicted RBP12.92□□□□□ -0.34
USE1-207ENST00000596136 PPP1R2P1Q96PQ5 205 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 FAM118BQ9BPY3 351 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 SUDS3Q9H7L9 328 aaPredicted RBP12.92□□□□□ -0.34
USE1-207ENST00000596136 ARNT2Q9HBZ2 717 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 IL26Q9NPH9 171 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 ZNHIT2Q9UHR6 403 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 TMPRSS11EQ9UL52 423 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 PCDHGA8Q9Y5G5 932 aa12.92□□□□□ -0.34
USE1-207ENST00000596136 A6NCN8 305 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 PRR19A6NJB7 356 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 F5H423 210 aaPredicted RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 GRID2O43424 1007 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 B4GAT1O43505 415 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 STK10O94804 968 aaKnown RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 MPOP05164 745 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 RPLP0P05388 317 aaKnown RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 ZNF8P17098 575 aaPredicted RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 PSMB4P28070 264 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 CCKBRP32239 447 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 ACTN2P35609 894 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 EIF2S3P41091 472 aaKnown RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 MLLT3P42568 568 aaPredicted RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 TNNT3P45378 269 aaPredicted RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 FASLGP48023 281 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 MAZP56270 477 aaKnown RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 ERVPABLB-1P60509 514 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 SQSTM1Q13501 440 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 CLPPQ16740 277 aaPredicted RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 ALS2CLQ60I27 953 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 DENND5AQ6IQ26 1287 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 ADGRG6Q86SQ4 1221 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 SFRP1Q8N474 314 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 WDR36Q8NI36 951 aaKnown RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 CCDC110Q8TBZ0 833 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 PATE1Q8WXA2 126 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 SLC46A1Q96NT5 459 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 C19orf43Q9BQ61 176 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 FSD1LQ9BXM9 530 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 OR2AG1Q9H205 316 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 BPIFA1Q9NP55 256 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 ASCL3Q9NQ33 180 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 GUCA1BQ9UMX6 200 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 R3HDM2Q9Y2K5 976 aaKnown RBP12.91□□□□□ -0.34
USE1-207ENST00000596136 ADAMTS20P59510 1910 aa12.91□□□□□ -0.34
USE1-207ENST00000596136 CCDC187A0A096LP49 1063 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 TCRBV7S2A1N4TA0A589 114 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 GAPDHSO14556 408 aaPredicted RBP12.9□□□□□ -0.34
USE1-207ENST00000596136 PPM1DO15297 605 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 VEGFDO43915 354 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 EML2O95834 649 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 GABREP78334 506 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 CCZ1BP86790 482 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 CCZ1P86791 482 aaPredicted RBP12.9□□□□□ -0.34
USE1-207ENST00000596136 PRPSAP1Q14558 356 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 PARP6Q2NL67 630 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 ATP13A5Q4VNC0 1218 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.9□□□□□ -0.34
USE1-207ENST00000596136 MEI1Q5TIA1 1274 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 KCTD11Q693B1 232 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 IYDQ6PHW0 289 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 CHST15Q7LFX5 561 aaPredicted RBP12.9□□□□□ -0.34
USE1-207ENST00000596136 GLT6D1Q7Z4J2 308 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 B3GNT8Q7Z7M8 397 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 PHYKPLQ8IUZ5 450 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 SLITRK4Q8IW52 837 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 BRSK1Q8TDC3 778 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 BLOC1S5Q8TDH9 187 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 RTP4Q96DX8 246 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 TMEM74Q96NL1 305 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 FICDQ9BVA6 458 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 FRMD8P1Q9BZ68 369 aaPredicted RBP12.9□□□□□ -0.34
USE1-207ENST00000596136 TBC1D29Q9UFV1 150 aa12.9□□□□□ -0.34
USE1-207ENST00000596136 FEZ2Q9UHY8 353 aaPredicted RBP12.9□□□□□ -0.34
USE1-207ENST00000596136 SATB2Q9UPW6 733 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms