RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 COPS8Q99627 209 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 ZDHHC3Q9NYG2 299 aa16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 CORO1CQ9ULV4 474 aaPredicted RBP16.83■□□□□ 0.28
SCAMP4-211ENST00000588907 SPAG17Q6Q759 2223 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 GOLGA8CPA6NN73 597 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 FADS2P1A8MWK0 482 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 RAD51BO15315 384 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 NDUFS3O75489 264 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 SLC25A14O95258 325 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 ZNF7P17097 686 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 HSD17B3P37058 310 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 NSG1P42857 185 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 PTGER3P43115 390 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 DHPSP49366 369 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 ADARP55265 1226 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 PFN3P60673 137 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 TEAD4Q15561 434 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 GPRC6AQ5T6X5 926 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 TEDDM1Q5T9Z0 273 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 TRMT10BQ6PF06 316 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 MARK2Q7KZI7 788 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 SERPINA9Q86WD7 417 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 RGL4Q8IZJ4 473 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 MFSD2AQ8NA29 543 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 C2CD4AQ8NCU7 369 aaPredicted RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 GDAP1Q8TB36 358 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 COX14Q96I36 57 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 CPNE1Q99829 537 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 ORAI3Q9BRQ5 295 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 APOOQ9BUR5 198 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 FZD3Q9NPG1 666 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 MBNL1Q9NR56 388 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 AASDHPPTQ9NRN7 309 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 IARS2Q9NSE4 1012 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 VPS18Q9P253 973 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 EIF2B4Q9UI10 523 aaKnown RBP16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 RAB23Q9ULC3 237 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 COMMD10Q9Y6G5 202 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 IKBKGQ9Y6K9 419 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 CUL9Q8IWT3 2517 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 BPTFQ12830 3046 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 THADAQ6YHU6 1953 aa16.82■□□□□ 0.28
SCAMP4-211ENST00000588907 FANCMQ8IYD8 2048 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 IGLV3-16A0A075B6K0 115 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 OR51F1A6NGY5 319 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 K7ESM1 405 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 VEGFDO43915 354 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 NUDT17P0C025 328 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 H2AFXP16104 143 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 CD38P28907 300 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 AKT1P31749 480 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 SLC1A2P43004 574 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 AFF3P51826 1226 aaKnown RBP16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 THOP1P52888 689 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 GTF2H3Q13889 308 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 SLC29A2Q14542 456 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 KBTBD12Q3ZCT8 623 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 BEND6Q5SZJ8 279 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 PSAPL1Q6NUJ1 521 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 GCNT7Q6ZNI0 430 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 CTAGE3PQ8IX95 158 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 PLA2G15Q8NCC3 412 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 ZNF514Q96K75 400 aaPredicted RBP16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 PKNOX2Q96KN3 472 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 AGAP2Q99490 1192 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 RMI1Q9H9A7 625 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 EBF2Q9HAK2 575 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 TRIM39Q9HCM9 518 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 RABGEF1Q9UJ41 708 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 FBXO5Q9UKT4 447 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 PCDHB1Q9Y5F3 818 aa16.81■□□□□ 0.28
SCAMP4-211ENST00000588907 A0A1B0GTW7 788 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 EXOC1LA0A1B0GW35 172 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 GOLGA8KD6RF30 607 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 H3BMM5 538 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 GOLGA8TH3BQL2 631 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 BCAT2O15382 392 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 UGT1A9O60656 530 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 AP2A2O94973 939 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 UGT1A6P19224 532 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 MSH3P20585 1137 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 UGT1A1P22309 533 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 UGT1A4P22310 534 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 UGT1A3P35503 534 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 UGT1A5P35504 534 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 LEPRP48357 1165 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 CSE1LP55060 971 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 EIF3BP55884 814 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 SRSF5Q13243 272 aaKnown RBP16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 NFATC4Q14934 902 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 DBN1Q16643 649 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 PEAR1Q5VY43 1037 aaPredicted RBP16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 MACC1Q6ZN28 852 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 TAOK1Q7L7X3 1001 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 CROCCP2Q86T23 111 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 SYT12Q8IV01 421 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 PIANPQ8IYJ0 282 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 ABCA7Q8IZY2 2146 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 DEFB119Q8N690 84 aa16.8■□□□□ 0.28
SCAMP4-211ENST00000588907 CEP76Q8TAP6 659 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms