RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 CNOT8Q9UFF9 292 aaKnown RBP13.97□□□□□ -0.17
CXXC1-208ENST00000587170 LIMA1Q9UHB6 759 aaKnown RBP13.97□□□□□ -0.17
CXXC1-208ENST00000587170 ZNHIT2Q9UHR6 403 aa13.97□□□□□ -0.17
CXXC1-208ENST00000587170 ADGRG1Q9Y653 693 aa13.97□□□□□ -0.17
CXXC1-208ENST00000587170 SEC16AO15027 2179 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 CSMD1Q96PZ7 3565 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 INPP4BO15327 924 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 PDGFAP04085 211 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 CCDC172P0C7W6 258 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 AMPD1P23109 780 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 IL1R2P27930 398 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 SERPINB6P35237 376 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 ARL4AP40617 200 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 RPL26P61254 145 aaKnown RBP13.96□□□□□ -0.17
CXXC1-208ENST00000587170 CHST15Q7LFX5 561 aaPredicted RBP13.96□□□□□ -0.17
CXXC1-208ENST00000587170 APTXQ7Z2E3 356 aaKnown RBP13.96□□□□□ -0.17
CXXC1-208ENST00000587170 LRRC49Q8IUZ0 686 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 FATE1Q969F0 183 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 TDRD1Q9BXT4 1180 aaKnown RBP13.96□□□□□ -0.17
CXXC1-208ENST00000587170 KLHL3Q9UH77 587 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 KCND3Q9UK17 655 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 TLK1Q9UKI8 766 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 MYO6Q9UM54 1294 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 RPL26L1Q9UNX3 145 aaKnown RBP13.96□□□□□ -0.17
CXXC1-208ENST00000587170 KCNK6Q9Y257 313 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 PRKAB1Q9Y478 270 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 APCP25054 2843 aa13.96□□□□□ -0.17
CXXC1-208ENST00000587170 OTOGQ6ZRI0 2925 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 CCDC88CQ9P219 2028 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 LRRC10BA6NIK2 292 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 FADS2P1A8MWK0 482 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 NUAK1O60285 661 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 PRLP01236 227 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 FGF5P12034 268 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 ACP5P13686 325 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 XRCC1P18887 633 aaPredicted RBP13.95□□□□□ -0.18
CXXC1-208ENST00000587170 GARSP41250 739 aaKnown RBP13.95□□□□□ -0.18
CXXC1-208ENST00000587170 NOP2P46087 812 aaKnown RBP13.95□□□□□ -0.18
CXXC1-208ENST00000587170 PPM1FP49593 454 aaPredicted RBP13.95□□□□□ -0.18
CXXC1-208ENST00000587170 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.95□□□□□ -0.18
CXXC1-208ENST00000587170 PRSS42Q7Z5A4 293 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 PHYKPLQ8IUZ5 450 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 AOPEPQ8N6M6 819 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 GALNT6Q8NCL4 622 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 NSMCE1Q8WV22 266 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 MAML1Q92585 1016 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 POLR1EQ9GZS1 481 aaKnown RBP13.95□□□□□ -0.18
CXXC1-208ENST00000587170 CARD9Q9H257 536 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 NT5MQ9NPB1 228 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.95□□□□□ -0.18
CXXC1-208ENST00000587170 FANCLQ9NW38 375 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 AMACRQ9UHK6 382 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 SCINQ9Y6U3 715 aa13.95□□□□□ -0.18
CXXC1-208ENST00000587170 GPR89AB7ZAQ6 455 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 CREG1O75629 220 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 SORBS2O94875 1100 aaKnown RBP13.94□□□□□ -0.18
CXXC1-208ENST00000587170 AGFG2O95081 481 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 NDUFA10O95299 355 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 ASMTLO95671 621 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 GPR89BP0CG08 455 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 GZMAP12544 262 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 TCF4P15884 667 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 CES1P23141 567 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 MAPK9P45984 424 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 SPINT3P49223 89 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 FOXM1Q08050 763 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 SEMA5AQ13591 1074 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 ERV3-1Q14264 604 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 SMTNL2Q2TAL5 461 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 PAPD7Q5XG87 772 aaKnown RBP13.94□□□□□ -0.18
CXXC1-208ENST00000587170 HIST2H2BCQ6DN03 193 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 TMEM26Q6ZUK4 368 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 TMEM135Q86UB9 458 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 TEKT4Q8WW24 435 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 KLHL6Q8WZ60 621 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 STAMBPL1Q96FJ0 436 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 PCMTD1Q96MG8 357 aaPredicted RBP13.94□□□□□ -0.18
CXXC1-208ENST00000587170 PLEKHG4BQ96PX9 1271 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 BRD8Q9H0E9 1235 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 MLXIPLQ9NP71 852 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 CUEDC1Q9NWM3 386 aaPredicted RBP13.94□□□□□ -0.18
CXXC1-208ENST00000587170 SEMA5BQ9P283 1151 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 RCOR3Q9P2K3 495 aaPredicted RBP13.94□□□□□ -0.18
CXXC1-208ENST00000587170 NFKBIL1Q9UBC1 381 aaPredicted RBP13.94□□□□□ -0.18
CXXC1-208ENST00000587170 PIKFYVEQ9Y2I7 2098 aa13.94□□□□□ -0.18
CXXC1-208ENST00000587170 RGSL1A5PLK6 1076 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 TMCO5BA8MYB1 307 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 C21orf140B9A014 251 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 CHUKO15111 745 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 GRID2O43424 1007 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 VPS4BO75351 444 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 KIAA0754O94854 1291 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 UBXN7O94888 489 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 CLDN7O95471 211 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 GNLYP22749 145 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 CAPZBP47756 277 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 SH3BP2P78314 561 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 UBXN1Q04323 297 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 DNASE1L3Q13609 305 aa13.93□□□□□ -0.18
CXXC1-208ENST00000587170 LAMB3Q13751 1172 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms