RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 FUCA1P04066 466 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 SLC2A4P14672 509 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 AKT1P31749 480 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 LMAN1P49257 510 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 GABREP78334 506 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 CAMK2BQ13554 666 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 ITGA9Q13797 1035 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 SEPT6Q14141 434 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 HLTFQ14527 1009 aaKnown RBP eCLIP10.79□□□□□ -0.68
NDEL1-208ENST00000580237 ISXQ2M1V0 245 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 C3orf38Q5JPI3 329 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 MEI1Q5TIA1 1274 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 CDCP2Q5VXM1 449 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 FOXR1Q6PIV2 292 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 NRROSQ86YC3 692 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 SLC13A5Q86YT5 568 aaPredicted RBP10.79□□□□□ -0.68
NDEL1-208ENST00000580237 TRAPPC5Q8IUR0 188 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 SFTPA2Q8IWL1 248 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 CACTIN-AS1Q8N1I8 211 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 TTC30BQ8N4P2 665 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 CCDC89Q8N998 374 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 SLC35B2Q8TB61 432 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 EID2BQ96D98 161 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 FRMD8P1Q9BZ68 369 aaPredicted RBP10.79□□□□□ -0.68
NDEL1-208ENST00000580237 LRRC40Q9H9A6 602 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 EPB41L5Q9HCM4 733 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 SPATS2LQ9NUQ6 558 aaKnown RBP10.79□□□□□ -0.68
NDEL1-208ENST00000580237 LRIT1Q9P2V4 623 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 ATXN10Q9UBB4 475 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 ZNF148Q9UQR1 794 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 PLEKHM1Q9Y4G2 1056 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 RNF215Q9Y6U7 377 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 PIKFYVEQ9Y2I7 2098 aa10.79□□□□□ -0.68
NDEL1-208ENST00000580237 URB1O60287 2271 aaKnown RBP10.79□□□□□ -0.68
NDEL1-208ENST00000580237 C5orf60A6NFR6 353 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 GPR89AB7ZAQ6 455 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 E7EVH7 732 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 NUDT21O43809 227 aaKnown RBP10.78□□□□□ -0.68
NDEL1-208ENST00000580237 NUAK1O60285 661 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 BRINP1O60477 761 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 SNX2O60749 519 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 DNAJC6O75061 913 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 MTX2O75431 263 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 ECEL1O95672 775 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 CRTAMO95727 393 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 GAS8O95995 478 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 MPOP05164 745 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 GPR89BP0CG08 455 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 ZNF8P17098 575 aaPredicted RBP10.78□□□□□ -0.68
NDEL1-208ENST00000580237 VCLP18206 1134 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 LPOP22079 712 aaPredicted RBP10.78□□□□□ -0.68
NDEL1-208ENST00000580237 GDF10P55107 478 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 CCL7P80098 99 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 PDE1BQ01064 536 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 OLIG2Q13516 323 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 SNX1Q13596 522 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 SPARCL1Q14515 664 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 TAF1AQ15573 450 aaPredicted RBP10.78□□□□□ -0.68
NDEL1-208ENST00000580237 PARP6Q2NL67 630 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 AMZ1Q400G9 498 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 ZNF648Q5T619 568 aaPredicted RBP10.78□□□□□ -0.68
NDEL1-208ENST00000580237 ZNF662Q6ZS27 426 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 SPRED1Q7Z699 444 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 LRRTM4Q86VH4 590 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 PATE1Q8WXA2 126 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 SCARF2Q96GP6 870 aaPredicted RBP10.78□□□□□ -0.68
NDEL1-208ENST00000580237 ATXN7L3BQ96GX2 97 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 DCBLD2Q96PD2 775 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 VPS35Q96QK1 796 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 GORASP1Q9BQQ3 440 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 STRADBQ9C0K7 418 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 LRRN3Q9H3W5 708 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 TRIM39Q9HCM9 518 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.78□□□□□ -0.68
NDEL1-208ENST00000580237 DKK4Q9UBT3 224 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 FEZ2Q9UHY8 353 aaPredicted RBP10.78□□□□□ -0.68
NDEL1-208ENST00000580237 RABGEF1Q9UJ41 708 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 CNOT6Q9ULM6 557 aaKnown RBP10.78□□□□□ -0.68
NDEL1-208ENST00000580237 RAXQ9Y2V3 346 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 ARL5AQ9Y689 179 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 FRYQ5TBA9 3013 aa10.78□□□□□ -0.68
NDEL1-208ENST00000580237 SPEGQ15772 3267 aa10.77□□□□□ -0.68
NDEL1-208ENST00000580237 SRRM3A6NNA2 597 aaPredicted RBP10.77□□□□□ -0.69
NDEL1-208ENST00000580237 PDZK1P1A8MUH7 402 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 PSMD3O43242 534 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 LIASO43766 372 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 VEGFDO43915 354 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 CDK14O94921 469 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 PRAMEF1O95521 474 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 PNLIPP16233 465 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 ALDH4A1P30038 563 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 RTP5Q14D33 572 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 CHRNA6Q15825 494 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 ATP13A5Q4VNC0 1218 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 LDLRAP1Q5SW96 308 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 OGFOD3Q6PK18 319 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 ADGRG6Q86SQ4 1221 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 TRIM48Q8IWZ4 208 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 NAGSQ8N159 534 aa10.77□□□□□ -0.69
NDEL1-208ENST00000580237 ARL14Q8N4G2 192 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms