RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MMP10P09238 476 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 CYP2C8P10632 490 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 POLD2P49005 469 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 CCNA1P78396 465 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 GALNT1Q10472 559 aaPredicted RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 GPR158Q5T848 1215 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 CCDC81Q6ZN84 652 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 ZDHHC13Q8IUH4 622 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 RYBPQ8N488 228 aaPredicted RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 CNIH3Q8TBE1 160 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 SLC2A14Q8TDB8 520 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 NSMCE2Q96MF7 247 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 NSUN5Q96P11 429 aaKnown RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 CPNE5Q9HCH3 593 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 SDR39U1Q9NRG7 319 aaPredicted RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 POLG2Q9UHN1 485 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 MRPL42Q9Y6G3 142 aaKnown RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 A0A1W2PP18 115 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 UBXN8O00124 270 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 TNFRSF10AO00220 468 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 CDK14O94921 469 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 GSNP06396 782 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 RBP1P09455 135 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 CHRNA5P30532 468 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 CHRNA4P43681 627 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 PPP5CP53041 499 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 CDC20Q12834 499 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 KCNAB2Q13303 367 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 PDZD4Q76G19 769 aaPredicted RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 LDB1Q86U70 411 aaPredicted RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 SLC22A9Q8IVM8 553 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 TTC39CQ8N584 583 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 PPHLN1Q8NEY8 458 aaKnown RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 FLAD1Q8NFF5 587 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 RHOXF1Q8NHV9 184 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 DYNC2LI1Q8TCX1 351 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 AURKBQ96GD4 344 aaPredicted RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 C12orf42Q96LP6 360 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 TBL1YQ9BQ87 522 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 FICDQ9BVA6 458 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 DSN1Q9H410 356 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 MOV10Q9HCE1 1003 aaKnown RBP14.33□□□□□ -0.12
SMG6-215ENST00000574501 TRHDEQ9UKU6 1024 aa14.33□□□□□ -0.12
SMG6-215ENST00000574501 IGKV6-21A0A0C4DH24 114 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 DYTNA2CJ06 578 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 RGS13O14921 159 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 DYRK3O43781 588 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 C1RP00736 705 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 PRKACGP22612 351 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 CXCR2P25025 360 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 CASP3P42574 277 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 TKTL1P51854 596 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 RABGGTBP53611 331 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 KCNK10P57789 538 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 GABARAPL2P60520 117 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 FOXM1Q08050 763 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 VAC14Q08AM6 782 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 FBXO48Q5FWF7 155 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 STEAP3Q658P3 488 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 TXNDC11Q6PKC3 985 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 TMEM207Q6UWW9 146 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 HFE2Q6ZVN8 426 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 SLC22A15Q8IZD6 547 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 FAM86B1Q8N7N1 296 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 OR52K2Q8NGK3 314 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 RORBQ92753 470 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 RPL3LQ92901 407 aaKnown RBP14.32□□□□□ -0.12
SMG6-215ENST00000574501 C17orf80Q9BSJ5 609 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 EMILIN2Q9BXX0 1053 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 SP140LQ9H930 580 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 TESMINQ9Y4I5 508 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 A0A1B0GTL3 188 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 AZIN1O14977 448 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 UPK1BO75841 260 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 CNTN5O94779 1100 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 MATN4O95460 622 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 LBPP18428 481 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 EIF2DP41214 584 aaKnown RBP14.32□□□□□ -0.12
SMG6-215ENST00000574501 ACADSBP45954 432 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 UFM1P61960 85 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 PHC1P78364 1004 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 E2F2Q14209 437 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 CRY1Q16526 586 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 NOMO2Q5JPE7 1267 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 HABP4Q5JVS0 413 aaKnown RBP14.32□□□□□ -0.12
SMG6-215ENST00000574501 RSBN1Q5VWQ0 802 aaPredicted RBP14.32□□□□□ -0.12
SMG6-215ENST00000574501 DESI1Q6ICB0 168 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 TMC5Q6UXY8 1006 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 FAM83AQ86UY5 434 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 PIM3Q86V86 326 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 LRRC49Q8IUZ0 686 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 FAM83FQ8NEG4 500 aaPredicted RBP14.32□□□□□ -0.12
SMG6-215ENST00000574501 MUC13Q9H3R2 512 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 ERVK-18Q9QC07 812 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 NUDT5Q9UKK9 219 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 UTS2RQ9UKP6 389 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 INVSQ9Y283 1065 aa14.32□□□□□ -0.12
SMG6-215ENST00000574501 RAD51BO15315 384 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 SNX2O60749 519 aa14.31□□□□□ -0.12
SMG6-215ENST00000574501 CHRNB1P11230 501 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms