RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 YWHAQP27348 245 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 HNF1BP35680 557 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 CDH12P55289 794 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 TMPRSS3P57727 454 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 RPS6P62753 249 aaKnown RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 CRYZQ08257 329 aaKnown RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 DSC1Q08554 894 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 GOLGA8FQ08AF8 430 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 ANKRD1Q15327 319 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 TAF5Q15542 800 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 STXBP2Q15833 593 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 QRICH1Q2TAL8 776 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 AP5B1Q2VPB7 878 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 ZNF284Q2VY69 593 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 FSCBQ5H9T9 825 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 FBXO47Q5MNV8 452 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 PRAMEF19Q5SWL8 479 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 ARHGEF16Q5VV41 709 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 CPLX2Q6PUV4 134 aaKnown RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 SPATA2LQ8IUW3 424 aaPredicted RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 SUGP1Q8IWZ8 645 aaKnown RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 RBFAQ8N0V3 343 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 FBXL16Q8N461 479 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 ZNF713Q8N859 430 aaPredicted RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 OR4N2Q8NGD1 307 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 SCFD2Q8WU76 684 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 CCDC12Q8WUD4 166 aaPredicted RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 SH3KBP1Q96B97 665 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 RNFT2Q96EX2 444 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 APOLD1Q96LR9 279 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 NPLQ9BXD5 320 aaPredicted RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 SPZ1Q9BXG8 430 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 SEZ6LQ9BYH1 1024 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 TM6SF1Q9BZW5 370 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 CTDSP1Q9GZU7 261 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 GLT8D2Q9H1C3 349 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 UPF2Q9HAU5 1272 aaKnown RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 Q9Y3F1 56 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 MYH4Q9Y623 1939 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 LAMA4Q16363 1823 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 A0A0G2JMZ2 1700 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 KLF18A0A0U1RQI7 1052 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 FAM157AC9JC47 383 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 IFRD1O00458 451 aaPredicted RBP4.19□□□□□ -1.74
NUP88-202ENST00000570937 CPLX1O14810 134 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 STAM2O75886 525 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 CABYRO75952 493 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 TNFRSF8P28908 595 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 GPR12P47775 334 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 METAP2P50579 478 aaKnown RBP eCLIP4.19□□□□□ -1.74
NUP88-202ENST00000570937 PAPOLAP51003 745 aaKnown RBP4.19□□□□□ -1.74
NUP88-202ENST00000570937 HSD17B4P51659 736 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 PMS2P54278 862 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 CNTN2Q02246 1040 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 INO80DQ53TQ3 878 aaPredicted RBP4.19□□□□□ -1.74
NUP88-202ENST00000570937 SH2D4BQ5SQS7 431 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 C8orf82Q6P1X6 216 aaPredicted RBP4.19□□□□□ -1.74
NUP88-202ENST00000570937 TMTC3Q6ZXV5 915 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 TRPV1Q8NER1 839 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 ZMIZ2Q8NF64 920 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 CEP70Q8NHQ1 597 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 PIBF1Q8WXW3 757 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 NEUROG1Q92886 237 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 GLT1D1Q96MS3 346 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 HERPUD2Q9BSE4 406 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 LRRC2Q9BYS8 371 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 CPVLQ9H3G5 476 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 CXorf56Q9H5V9 222 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 PSTPIP2Q9H939 334 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 CD93Q9NPY3 652 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 ITM2CQ9NQX7 267 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 PDRG1Q9NUG6 133 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 NLKQ9UBE8 527 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 GDAQ9Y2T3 454 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 SRPRBQ9Y5M8 271 aaKnown RBP4.19□□□□□ -1.74
NUP88-202ENST00000570937 MKI67P46013 3256 aaKnown RBP4.19□□□□□ -1.74
NUP88-202ENST00000570937 RLFQ13129 1914 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 MROH7Q68CQ1 1323 aa4.19□□□□□ -1.74
NUP88-202ENST00000570937 ZNF236Q9UL36 1845 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 A0A096LPK6 155 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 CYTH3O43739 400 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 LIASO43766 372 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 CBX6O95503 412 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 GLUD1P00367 558 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 PGK1P00558 417 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 SERPINC1P01008 464 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 CBSLP0DN79 551 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 TGFB3P10600 412 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 PLA2G2AP14555 144 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 XBP1P17861 261 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 RXRAP19793 462 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 GNA11P29992 359 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 CCND2P30279 289 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 HOXA13P31271 388 aaPredicted RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 RFC1P35251 1148 aaPredicted RBP4.18□□□□□ -1.74
NUP88-202ENST00000570937 CBSP35520 551 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 PTPN9P43378 593 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 GLUD2P49448 558 aa4.18□□□□□ -1.74
NUP88-202ENST00000570937 ACLYP53396 1101 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms