RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 TMOD2Q9NZR1 351 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZNF580Q9UK33 172 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 ISY1Q9ULR0 285 aaKnown RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 HSF4Q9ULV5 492 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CYP46A1Q9Y6A2 500 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 SPTBN5Q9NRC6 3674 aaKnown RBP3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 SIPA1L1O43166 1804 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 DNAH12Q6ZR08 3092 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 SMCHD1A6NHR9 2005 aa3.48□□□□□ -1.85
HMGB1P6-201ENST00000569046 CLSPNQ9HAW4 1339 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 COL11A1P12107 1806 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 REV3LO60673 3130 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 hCG_1807616A0A1W2PRN6 198 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 FAM170AA1A519 330 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 VWA3AA6NCI4 1184 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 OR6C68A6NDL8 312 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 LDB2O43679 373 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 DKC1O60832 514 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 CBX6O95503 412 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 ADRB2P07550 413 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 FOSL2P15408 326 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 GNLYP22749 145 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 TNFRSF8P28908 595 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 CDC25AP30304 524 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 HNF1BP35680 557 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 RGS2P41220 211 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 DPP6P42658 865 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 CLCNKBP51801 687 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZP1P60852 638 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 ARF3P61204 181 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 ARF1P84077 181 aaKnown RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 ROR2Q01974 943 aaKnown RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 Q0VFX4 171 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 SPP2Q13103 211 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 PLCB4Q15147 1175 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 TBCEQ15813 527 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 SHROOM1Q2M3G4 852 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 TWISTNBQ3B726 338 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 CTXN3Q4LDR2 81 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 FNBP1LQ5T0N5 605 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 HEPHL1Q6MZM0 1159 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 GJB7Q6PEY0 223 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 SLC22A25Q6T423 547 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 SERPINA11Q86U17 422 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 NEXN-AS1Q8NBZ9 246 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 FAM151AQ8WW52 585 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 ADAMTS14Q8WXS8 1223 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 DNAAF4Q8WXU2 420 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 NEUROG1Q92886 237 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 BADQ92934 168 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 FAM122AQ96E09 287 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 LBHD1Q9BQE6 289 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 CLSTN3Q9BQT9 956 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 SF3B5Q9BWJ5 86 aaKnown RBP3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 ITPAQ9BY32 194 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 NOD2Q9HC29 1040 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 GRHL1Q9NZI5 618 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 SEL1LQ9UBV2 794 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 ZNF112Q9UJU3 913 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 PCDHGB4Q9UN71 923 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 NAALADL1Q9UQQ1 740 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 LRP12Q9Y561 859 aa3.47□□□□□ -1.85
HMGB1P6-201ENST00000569046 MYH1P12882 1939 aa3.46□□□□□ -1.85
HMGB1P6-201ENST00000569046 LAMA2P24043 3122 aaKnown RBP3.46□□□□□ -1.85
HMGB1P6-201ENST00000569046 PRUNE2Q8WUY3 3088 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 BICDL2A1A5D9 508 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 CLEC18AA5D8T8 446 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 PABPN1LA6NDY0 278 aaKnown RBP3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 OR6C75A6NL08 312 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 CXCL11O14625 94 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 IKBKBO14920 756 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 STRNO43815 780 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 SLC28A2O43868 658 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 SCGB1D1O95968 90 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 CLTBP09497 229 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 ACADMP11310 421 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 IL11P20809 199 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 ITGB8P26012 769 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 OAS2P29728 719 aaKnown RBP3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 CCKBRP32239 447 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 GGT5P36269 586 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 MLH1P40692 756 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 SKIV2L2P42285 1042 aaKnown RBP3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 ENTPD1P49961 510 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 HMGCS2P54868 508 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 KRT83P78385 493 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 ANKRD1Q15327 319 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 GPR68Q15743 365 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 SLC30A6Q6NXT4 461 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 RPUSD3Q6P087 351 aaKnown RBP3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 DENND1BQ6P3S1 775 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 CRELD2Q6UXH1 353 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 PXKQ7Z7A4 578 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZSCAN30Q86W11 494 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 ARMC8Q8IUR7 673 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 ZDHHC23Q8IYP9 409 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 SCYL3Q8IZE3 742 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 FBXL14Q8N1E6 418 aa3.46□□□□□ -1.86
HMGB1P6-201ENST00000569046 CLEC18CQ8NCF0 446 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms