RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ATCAYQ86WG3 371 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 LPCAT1Q8NF37 534 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 CT55Q8WUE5 264 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 SPOCK2Q92563 424 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 RSC1A1Q92681 617 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 ZNF599Q96NL3 588 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 DPYSL5Q9BPU6 564 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 TWSG1Q9GZX9 223 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 SARS2Q9NP81 518 aaKnown RBP14.68□□□□□ -0.06
USB1-214ENST00000568848 PARVAQ9NVD7 372 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 KCND3Q9UK17 655 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 DNAJC16Q9Y2G8 782 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 ESPL1Q14674 2120 aa14.68□□□□□ -0.06
USB1-214ENST00000568848 DDX3YO15523 660 aaKnown RBP14.67□□□□□ -0.06
USB1-214ENST00000568848 MTX2O75431 263 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 PRLP01236 227 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 RARAP10276 462 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 UBE2IP63279 158 aaKnown RBP14.67□□□□□ -0.06
USB1-214ENST00000568848 MARC1Q5VT66 337 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 C6orf15Q6UXA7 325 aaPredicted RBP14.67□□□□□ -0.06
USB1-214ENST00000568848 FAM92BQ6ZTR7 304 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 RASGRP3Q8IV61 690 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 CCDC13Q8IYE1 715 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 ESX1Q8N693 406 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 C9orf72Q96LT7 481 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 HSD3B7Q9H2F3 369 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 PCDH18Q9HCL0 1135 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 KLC4Q9NSK0 619 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 ZNF624Q9P2J8 865 aaPredicted RBP14.67□□□□□ -0.06
USB1-214ENST00000568848 ATXN10Q9UBB4 475 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 KCTD3Q9Y597 815 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 CRYBG3Q68DQ2 2970 aa14.67□□□□□ -0.06
USB1-214ENST00000568848 MN1Q10571 1320 aaPredicted RBP14.66□□□□□ -0.06
USB1-214ENST00000568848 LRBAP50851 2863 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 PIPSLA2A3N6 862 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 TTLL8A6PVC2 850 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 MKRN2OSH3BPM6 223 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 RNF8O76064 485 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 NDUFA10O95299 355 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 FTLP02792 175 aaPredicted RBP14.66□□□□□ -0.06
USB1-214ENST00000568848 PIRTP0C851 137 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 ATP1A3P13637 1013 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 F3P13726 295 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 IL4RP24394 825 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 GJC1P36383 396 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 EPHB1P54762 984 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 MRPL49Q13405 166 aaKnown RBP14.66□□□□□ -0.06
USB1-214ENST00000568848 ZNF571Q7Z3V5 609 aaPredicted RBP14.66□□□□□ -0.06
USB1-214ENST00000568848 EXD1Q8NHP7 514 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 EID2BQ96D98 161 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 STAMBPL1Q96FJ0 436 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 GBP4Q96PP9 640 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 OR2AG1Q9H205 316 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 PPIL1Q9Y3C6 166 aa14.66□□□□□ -0.06
USB1-214ENST00000568848 CELSR2Q9HCU4 2923 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 LRRC53A6NM62 1247 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 OR52A4PA6NMU1 304 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 DDX3XO00571 662 aaKnown RBP eCLIP14.65□□□□□ -0.062e-15■■■■■ 27.4
USB1-214ENST00000568848 GRID2O43424 1007 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 RFPL1O75677 317 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 RASSF9O75901 435 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 HLA-DQB2P05538 268 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 SKILP12757 684 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 FERP16591 822 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 RPL10P27635 214 aaKnown RBP14.65□□□□□ -0.06
USB1-214ENST00000568848 HSPA9P38646 679 aaKnown RBP14.65□□□□□ -0.06
USB1-214ENST00000568848 SLC19A1P41440 591 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 HCAR3P49019 387 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 DRG2P55039 364 aaKnown RBP14.65□□□□□ -0.06
USB1-214ENST00000568848 MC1RQ01726 317 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 DNASE1L3Q13609 305 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 IL10RAQ13651 578 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 LRP8Q14114 963 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 GALNT3Q14435 633 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 DPYSL2Q16555 572 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 KHDC1Q4VXA5 237 aaKnown RBP14.65□□□□□ -0.06
USB1-214ENST00000568848 TCTN3Q6NUS6 607 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 LYSMD3Q7Z3D4 306 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 SLC9B2Q86UD5 537 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 TTC30BQ8N4P2 665 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 LZTR1Q8N653 840 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 ARRDC2Q8TBH0 407 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 CPT1CQ8TCG5 803 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 EFHD1Q9BUP0 239 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 TDRD1Q9BXT4 1180 aaKnown RBP14.65□□□□□ -0.06
USB1-214ENST00000568848 MFRPQ9BY79 579 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 HAUS4Q9H6D7 363 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 DONSONQ9NYP3 566 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 LIMA1Q9UHB6 759 aaKnown RBP14.65□□□□□ -0.06
USB1-214ENST00000568848 POLHQ9Y253 713 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 PCSK5Q92824 1860 aa14.65□□□□□ -0.06
USB1-214ENST00000568848 C1orf232A0A0U1RR37 186 aa14.64□□□□□ -0.07
USB1-214ENST00000568848 A0A1W2PQ67 120 aa14.64□□□□□ -0.07
USB1-214ENST00000568848 ARGFXA6NJG6 315 aa14.64□□□□□ -0.07
USB1-214ENST00000568848 VPS4BO75351 444 aa14.64□□□□□ -0.07
USB1-214ENST00000568848 SPAG6O75602 509 aa14.64□□□□□ -0.07
USB1-214ENST00000568848 CREG1O75629 220 aa14.64□□□□□ -0.07
USB1-214ENST00000568848 UBXN7O94888 489 aa14.64□□□□□ -0.07
USB1-214ENST00000568848 C9P02748 559 aa14.64□□□□□ -0.07
USB1-214ENST00000568848 TPM2P07951 284 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms