RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 ANKRD20A8PQ5CZ79 823 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 HENMT1Q5T8I9 393 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 SASS6Q6UVJ0 657 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 APTXQ7Z2E3 356 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 AOPEPQ8N6M6 819 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 MAML1Q92585 1016 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 C9orf72Q96LT7 481 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 FAM83DQ9H4H8 585 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 HAUS4Q9H6D7 363 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 LRRC4CQ9HCJ2 640 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 PRDM8Q9NQV8 689 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 AIPL1Q9NZN9 384 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 CNOT6Q9ULM6 557 aaKnown RBP15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 KCNK6Q9Y257 313 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 PLAAQ9Y263 795 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 PCDHGA6Q9Y5G7 932 aa15.57■□□□□ 0.08
HERPUD1-215ENST00000568676 LRRC53A6NM62 1247 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 MATN3O15232 486 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 GRID2O43424 1007 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 RFPL1O75677 317 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 CLDN7O95471 211 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 GARSP41250 739 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 SPINT3P49223 89 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 UBE2IP63279 158 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 FOXM1Q08050 763 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 NIPA2Q8N8Q9 360 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 STAMBPL1Q96FJ0 436 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 ISCUQ9H1K1 167 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 ZNF768Q9H5H4 540 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 PCDH18Q9HCL0 1135 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 KLHL3Q9UH77 587 aa15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 OAS3Q9Y6K5 1087 aaKnown RBP15.56■□□□□ 0.08
HERPUD1-215ENST00000568676 A0A0U1RQS6 177 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 C1orf232A0A0U1RR37 186 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 SNX2O60749 519 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 MTA2O94776 668 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 UBXN7O94888 489 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 CCNYL3P0C7X3 344 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 CCNCP24863 283 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 PMS2P54278 862 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 GALNT2Q10471 571 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 KRT81Q14533 505 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 STX1AQ16623 288 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 IFI16Q16666 785 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 C4orf17Q53FE4 359 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 CCDC122Q5T0U0 273 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 PDPK2PQ6A1A2 396 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 TMEM26Q6ZUK4 368 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 ASB18Q6ZVZ8 466 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 ZNF571Q7Z3V5 609 aaPredicted RBP15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 APLFQ8IW19 511 aaPredicted RBP15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 RBM12BQ8IXT5 1001 aaKnown RBP15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 TSGA13Q96PP4 275 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 TBC1D10AQ9BXI6 508 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 PCDH9Q9HC56 1237 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 RAD18Q9NS91 495 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 MYO1AQ9UBC5 1043 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 CROTQ9UKG9 612 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 CHKBQ9Y259 395 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 PRKAB1Q9Y478 270 aa15.55■□□□□ 0.08
HERPUD1-215ENST00000568676 FADS2P1A8MWK0 482 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 C21orf140B9A014 251 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 DDX3XO00571 662 aaKnown RBP eCLIP15.54■□□□□ 0.083e-18■■■■□ 26.5
HERPUD1-215ENST00000568676 MTSS1O43312 755 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 VPS4BO75351 444 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 NDUFA10O95299 355 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 PRLP01236 227 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 VIPP01282 170 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 FGF5P12034 268 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 AMD1P17707 334 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 KLHL30Q0D2K2 578 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 PAFAH1B3Q15102 231 aaKnown RBP15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 PRSS42Q7Z5A4 293 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 RASGRP3Q8IV61 690 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 TRIM48Q8IWZ4 208 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 FAM71BQ8TC56 605 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 FCRL4Q96PJ5 515 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 PLEKHG4BQ96PX9 1271 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 WDR24Q96S15 920 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 ZSCAN5AQ9BUG6 496 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 MLPHQ9BV36 600 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 ADGRE3Q9BY15 652 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 TRIM39Q9HCM9 518 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 POT1Q9NUX5 634 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 RBM22Q9NW64 420 aaKnown RBP eCLIP15.54■□□□□ 0.086e-8■■■■■ 33.4
HERPUD1-215ENST00000568676 IP6K2Q9UHH9 426 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 PADI1Q9ULC6 663 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 VPS4AQ9UN37 437 aa15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 PCYT1BQ9Y5K3 369 aaPredicted RBP15.54■□□□□ 0.08
HERPUD1-215ENST00000568676 BLACEA4D250 179 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 ANKRD66B4E2M5 251 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 CREG1O75629 220 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 F8A1P23610 371 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 DCDC1P59894 354 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 DSC2Q02487 901 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 SLC25A11Q02978 314 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 ERV3-1Q14264 604 aa15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 HADHQ16836 314 aaKnown RBP15.53■□□□□ 0.08
HERPUD1-215ENST00000568676 ATP1A1-AS1Q5TC04 95 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms