RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 RAB41Q5JT25 222 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PHYHD1Q5SRE7 291 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 CES3Q6UWW8 571 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 CAMKMTQ7Z624 323 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 VTCN1Q7Z7D3 282 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ADAMTSL2Q86TH1 951 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 FAM228AQ86W67 206 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 CXorf67Q86X51 503 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 ZNF679Q8IYX0 411 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 LZTR1Q8N653 840 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ZNF366Q8N895 744 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 FAM181AQ8N9Y4 354 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 TTC29Q8NA56 475 aaPredicted RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 CNBD1Q8NA66 436 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 NCOA7Q8NI08 942 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ZNF507Q8TCN5 953 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 GTPBP3Q969Y2 492 aaKnown RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 DCPSQ96C86 337 aaKnown RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 C16orf58Q96GQ5 468 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 TCTN2Q96GX1 697 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 CCDC140Q96MF4 163 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 TBC1D32Q96NH3 1257 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 SECISBP2Q96T21 854 aaKnown RBP3.07□□□□□ -1.92
CHD9-216ENST00000565803 SSX3Q99909 188 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PKP2Q99959 881 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.07□□□□□ -1.92
CHD9-216ENST00000565803 POLR1BQ9H9Y6 1135 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PCDH9Q9HC56 1237 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 C12orf4Q9NQ89 552 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 YAE1D1Q9NRH1 226 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 KLC4Q9NSK0 619 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 CYP39A1Q9NYL5 469 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 LRIT1Q9P2V4 623 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 SPATA2Q9UM82 520 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 MAD1L1Q9Y6D9 718 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 PLXNA1Q9UIW2 1896 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 ATG2AQ2TAZ0 1938 aa3.07□□□□□ -1.92
CHD9-216ENST00000565803 DOCK1Q14185 1865 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 A8MUI8 341 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 FAM171A2A8MVW0 826 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 H0Y8X5 98 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 K7EQM0 130 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 NKRFO15226 690 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD9-216ENST00000565803 PJA2O43164 708 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 SEPT4O43236 478 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 TGFB1I1O43294 461 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 RNF13O43567 381 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 TLX2O43763 284 aaPredicted RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 LILRB5O75023 590 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 GBAP04062 536 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 A1BGP04217 495 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 YES1P07947 543 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PABPC4LP0CB38 370 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 IFNGR1P15260 489 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PFKLP17858 780 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 IL32P24001 234 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 EDNRBP24530 442 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 CD1BP29016 333 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 HLA-FP30511 346 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ARHGAP25P42331 645 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PIK3CGP48736 1102 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PXNP49023 591 aaPredicted RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 CEBPDP49716 269 aaPredicted RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 STARD6P59095 220 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 SRP54P61011 504 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 PPP1R8Q12972 351 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 SRSF5Q13243 272 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 CRHR2Q13324 411 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ZNF311Q5JNZ3 666 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PAGE2BQ5JRK9 111 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PLEKHS1Q5SXH7 462 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 LCN1P1Q5VSP4 162 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 LRRC38Q5VT99 294 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 WBP2NLQ6ICG8 309 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PSAPL1Q6NUJ1 521 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 OVCH1Q7RTY7 1134 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 MON1AQ86VX9 555 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 FAM131BQ86XD5 332 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PPP1R3BQ86XI6 285 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ELMOD2Q8IZ81 293 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 NECAB1Q8N987 351 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 OR13H1Q8NG92 308 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 OR2T34Q8NGX1 318 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 OSCP1Q8WVF1 389 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 TCP11Q8WWU5 503 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 RSC1A1Q92681 617 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 SLAMF9Q96A28 289 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ULK4Q96C45 1275 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 TMCO6Q96DC7 493 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 C19orf60Q96EN9 201 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 KLHL15Q96M94 604 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ZNF607Q96SK3 696 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 MPHOSPH9Q99550 1183 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ASCL2Q99929 193 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 PDCD2LQ9BRP1 358 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 EIF2AQ9BY44 585 aaKnown RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 KLC2Q9H0B6 622 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 ASCC2Q9H1I8 757 aaPredicted RBP3.06□□□□□ -1.92
CHD9-216ENST00000565803 SLC26A1Q9H2B4 701 aa3.06□□□□□ -1.92
CHD9-216ENST00000565803 MUC13Q9H3R2 512 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms