RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 TRIM39Q9HCM9 518 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 IL17CQ9P0M4 197 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 TTC7AQ9ULT0 858 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-211ENST00000557623 GPR34Q9UPC5 381 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 TMEM98Q9Y2Y6 226 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 GOLGA4Q13439 2230 aaKnown RBP12.39□□□□□ -0.43
SLIRP-211ENST00000557623 LY6G6EA0A0G2JKS1 128 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 EME2A4GXA9 379 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-211ENST00000557623 E7EVH7 732 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 CES2O00748 559 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 USP12O75317 370 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 TOP3BO95985 862 aaKnown RBP12.38□□□□□ -0.43
SLIRP-211ENST00000557623 GAS8O95995 478 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 FUCA1P04066 466 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
SLIRP-211ENST00000557623 ADCY8P40145 1251 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 LMAN1P49257 510 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 ITGA9Q13797 1035 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 LRP8Q14114 963 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 SPARCL1Q14515 664 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 TCEA2Q15560 299 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 SMAD1Q15797 465 aaKnown RBP12.38□□□□□ -0.43
SLIRP-211ENST00000557623 PYCR3Q53H96 274 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 GSTA5Q7RTV2 222 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 TRIM74Q86UV6 250 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 TMPRSS12Q86WS5 348 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 SLC35F3Q8IY50 421 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 IFI44Q8TCB0 444 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 SUDS3Q9H7L9 328 aaPredicted RBP12.38□□□□□ -0.43
SLIRP-211ENST00000557623 GULP1Q9UBP9 304 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 MSRB2Q9Y3D2 182 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 ARL5AQ9Y689 179 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 OAS3Q9Y6K5 1087 aaKnown RBP12.38□□□□□ -0.43
SLIRP-211ENST00000557623 U3KQA8 63 aa12.38□□□□□ -0.43
SLIRP-211ENST00000557623 GLYATL1P3A0A0U1RQE8 302 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 CPED1A4D0V7 1026 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 VEGFDO43915 354 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 NUAK1O60285 661 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 DNAJC6O75061 913 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 HADHAP40939 763 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 CTBSQ01459 385 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 OLIG2Q13516 323 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 DENND5AQ6IQ26 1287 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 OGFOD3Q6PK18 319 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 MARK2Q7KZI7 788 aaKnown RBP12.37□□□□□ -0.43
SLIRP-211ENST00000557623 EFL1Q7Z2Z2 1120 aaKnown RBP12.37□□□□□ -0.43
SLIRP-211ENST00000557623 CACTIN-AS1Q8N1I8 211 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 CCL4L1Q8NHW4 92 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 WDR48Q8TAF3 677 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 OSBPL9Q96SU4 736 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 DPEP2Q9H4A9 486 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 ETNK1Q9HBU6 452 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 IL26Q9NPH9 171 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 RAB6BQ9NRW1 208 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 SIRPGQ9P1W8 387 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 ZNHIT2Q9UHR6 403 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 APPL1Q9UKG1 709 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 KLK13Q9UKR3 277 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 PADI4Q9UM07 663 aa12.37□□□□□ -0.43
SLIRP-211ENST00000557623 SPTBN2O15020 2390 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 USP27XA6NNY8 438 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 PGRMC1O00264 195 aaKnown RBP12.36□□□□□ -0.43
SLIRP-211ENST00000557623 GRID2O43424 1007 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 BUD23O43709 281 aaKnown RBP12.36□□□□□ -0.43
SLIRP-211ENST00000557623 SUN1O94901 812 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 MYF5P13349 255 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 ETS1P14921 441 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 JUPP14923 745 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 SPINK2P20155 84 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 CDH17Q12864 832 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 MSLNQ13421 630 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-211ENST00000557623 SEMA5AQ13591 1074 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 LAMB3Q13751 1172 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 GTF2H3Q13889 308 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 CHRNA6Q15825 494 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 ATP13A5Q4VNC0 1218 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 LDLRAP1Q5SW96 308 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 HES3Q5TGS1 186 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 GUSBP11Q6P575 273 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 FAM151BQ6UXP7 276 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 PPP1R21Q6ZMI0 780 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 CCNI2Q6ZMN8 369 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-211ENST00000557623 ADGRG6Q86SQ4 1221 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 NRROSQ86YC3 692 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 TAB3Q8N5C8 712 aaPredicted RBP12.36□□□□□ -0.43
SLIRP-211ENST00000557623 PRELID2Q8N945 189 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 DNAAF3Q8N9W5 541 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 KYQ8NBH2 561 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 GPR156Q8NFN8 814 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 OR4K2Q8NGD2 314 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 GDAP1Q8TB36 358 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 MAPK15Q8TD08 544 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 ACTRT1Q8TDG2 376 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 REPIN1Q9BWE0 567 aaKnown RBP12.36□□□□□ -0.43
SLIRP-211ENST00000557623 ZCCHC2Q9C0B9 1178 aaKnown RBP12.36□□□□□ -0.43
SLIRP-211ENST00000557623 OR2AG1Q9H205 316 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 TAAR2Q9P1P5 351 aa12.36□□□□□ -0.43
SLIRP-211ENST00000557623 ATXN10Q9UBB4 475 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms