RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 ZNF423Q2M1K9 1284 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 KLHL38Q2WGJ6 581 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 AASDHQ4L235 1098 aaPredicted RBP16.31■□□□□ 0.2
PCNX4-213ENST00000556907 ANKRD20A4Q4UJ75 823 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 RAET1GQ6H3X3 334 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 KIAA0930Q6ICG6 404 aaPredicted RBP16.31■□□□□ 0.2
PCNX4-213ENST00000556907 MACC1Q6ZN28 852 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 CAPN12Q6ZSI9 719 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 CYS1Q717R9 158 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 TRAM1L1Q8N609 369 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.31■□□□□ 0.2
PCNX4-213ENST00000556907 STYXQ8WUJ0 223 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 PKNOX2Q96KN3 472 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 RUFY1Q96T51 708 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 TRIM56Q9BRZ2 755 aaKnown RBP16.31■□□□□ 0.2
PCNX4-213ENST00000556907 TEX101Q9BY14 249 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 WDR26Q9H7D7 661 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 PPCSQ9HAB8 311 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 TREX1Q9NSU2 369 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 APPL1Q9UKG1 709 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 RPS6KL1Q9Y6S9 549 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 FAM169AQ9Y6X4 670 aa16.31■□□□□ 0.2
PCNX4-213ENST00000556907 PCDH15Q96QU1 1955 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 ZCWPW2A0A1B0GU75 182 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 TNFRSF10CO14798 259 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 LDB2O43679 373 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 TCEA3O75764 348 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 C1QAP02745 245 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 BPIP17213 487 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 PSMA3P25788 255 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 NMBRP28336 390 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 SPAM1P38567 509 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 BLKP51451 505 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 ZNF140P52738 457 aaPredicted RBP16.3■□□□□ 0.2
PCNX4-213ENST00000556907 LIMK1P53667 647 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 ACVR1Q04771 509 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 ZNF844Q08AG5 666 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 SLC14A1Q13336 389 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 NAB1Q13506 487 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 ITGA9Q13797 1035 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 PDE1CQ14123 709 aaPredicted RBP16.3■□□□□ 0.2
PCNX4-213ENST00000556907 SF3A2Q15428 464 aaKnown RBP16.3■□□□□ 0.2
PCNX4-213ENST00000556907 SKIDA1Q1XH10 827 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 TSTD2Q5T7W7 516 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 C3orf62Q6ZUJ4 267 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 CROCCP2Q86T23 111 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 PARGQ86W56 976 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 FBF1Q8TES7 1133 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 SCAMP4Q969E2 229 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 ELF4Q99607 663 aaPredicted RBP16.3■□□□□ 0.2
PCNX4-213ENST00000556907 RIOK2Q9BVS4 552 aaKnown RBP16.3■□□□□ 0.2
PCNX4-213ENST00000556907 SMOC1Q9H4F8 434 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 TMEM9BQ9NQ34 198 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 RABGEF1Q9UJ41 708 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 CA5BQ9Y2D0 317 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 SNX11Q9Y5W9 270 aa16.3■□□□□ 0.2
PCNX4-213ENST00000556907 A0A0U1RQS6 177 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 EXOC1LA0A1B0GW35 172 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 FAM159BA6NKW6 160 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 H7C0S8 307 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 AGPSO00116 658 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 MYCLP1P12525 358 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-213ENST00000556907 PAMP19021 973 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 SDHBP21912 280 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 BNC1Q01954 994 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 IFFO1Q0D2I5 559 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 HLA-BQ31612 363 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 TCEAL6Q6IPX3 200 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 SPATS2Q86XZ4 545 aaKnown RBP16.29■□□□□ 0.2
PCNX4-213ENST00000556907 SLC22A18ASQ8N1D0 253 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 RIBC1Q8N443 379 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-213ENST00000556907 PLA2G15Q8NCC3 412 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 GPR26Q8NDV2 337 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 OR4K2Q8NGD2 314 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 OR2W6PQ8NHA6 318 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 UHMK1Q8TAS1 419 aaKnown RBP16.29■□□□□ 0.2
PCNX4-213ENST00000556907 BTN2A2Q8WVV5 523 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 TCEAL3Q969E4 200 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 FUBP1Q96AE4 644 aaKnown RBP16.29■□□□□ 0.2
PCNX4-213ENST00000556907 MFSD3Q96ES6 412 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 CERS2Q96G23 380 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 HIC2Q96JB3 615 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 TBATAQ96M53 351 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 WDR92Q96MX6 357 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 FCRL3Q96P31 734 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-213ENST00000556907 VPS35Q96QK1 796 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 CYTH2Q99418 400 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 SH3GL2Q99962 352 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 CCDC77Q9BR77 488 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 EDEM2Q9BV94 578 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 SPATA16Q9BXB7 569 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 ROPN1BQ9BZX4 212 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-213ENST00000556907 GAREM1Q9H706 876 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 ROPN1Q9HAT0 212 aaPredicted RBP16.29■□□□□ 0.2
PCNX4-213ENST00000556907 CHRAC1Q9NRG0 131 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 DNAAF2Q9NVR5 837 aaKnown RBP16.29■□□□□ 0.2
PCNX4-213ENST00000556907 MOCS1Q9NZB8 636 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 CD84Q9UIB8 345 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 PCDHGB2Q9Y5G2 931 aa16.29■□□□□ 0.2
PCNX4-213ENST00000556907 ARL5AQ9Y689 179 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms