RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 ZCCHC14Q8WYQ9 949 aaKnown RBP11.44□□□□□ -0.58
SLIRP-205ENST00000556310 RTP4Q96DX8 246 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 GULP1Q9UBP9 304 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 CLCA2Q9UQC9 943 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 TMEM98Q9Y2Y6 226 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 OAS3Q9Y6K5 1087 aaKnown RBP11.44□□□□□ -0.58
SLIRP-205ENST00000556310 DMXL2Q8TDJ6 3036 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 ZZEF1O43149 2961 aa11.44□□□□□ -0.58
SLIRP-205ENST00000556310 B4DGG1 531 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 LIASO43766 372 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 NOBOXO60393 691 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 DNAJC6O75061 913 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 PPFIA2O75334 1257 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 ASMTLO95671 621 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 MT-CO3P00414 261 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 AGTP01019 485 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 ATP1A1P05023 1023 aaKnown RBP11.43□□□□□ -0.58
SLIRP-205ENST00000556310 GDF10P55107 478 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 CTBSQ01459 385 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 TARDBPQ13148 414 aaKnown RBP eCLIP11.43□□□□□ -0.58
SLIRP-205ENST00000556310 PEX6Q13608 980 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 OASLQ15646 514 aaKnown RBP11.43□□□□□ -0.58
SLIRP-205ENST00000556310 ST3GAL2Q16842 350 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 P3H1Q32P28 736 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 C14orf28Q4W4Y0 310 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 PYCR3Q53H96 274 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 CERCAMQ5T4B2 595 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 OGFOD3Q6PK18 319 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 RANBP10Q6VN20 620 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 MARK2Q7KZI7 788 aaKnown RBP11.43□□□□□ -0.58
SLIRP-205ENST00000556310 WDR48Q8TAF3 677 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 DTX3LQ8TDB6 740 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 ATG4AQ8WYN0 398 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 GLYATL1Q969I3 302 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 CCDC74AQ96AQ1 378 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 LRRC45Q96CN5 670 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 NXPE2Q96DL1 559 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 DEPDC7Q96QD5 511 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 VPS35Q96QK1 796 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 CCDC3Q9BQI4 270 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 TMEM121Q9BTD3 319 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 TLR10Q9BXR5 811 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 ABCG4Q9H172 646 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 DPEP2Q9H4A9 486 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 RMI1Q9H9A7 625 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 IL17CQ9P0M4 197 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 TAAR2Q9P1P5 351 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 PKD1L2Q7Z442 2459 aa11.43□□□□□ -0.58
SLIRP-205ENST00000556310 GPR89AB7ZAQ6 455 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 TCEA3O75764 348 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 CAPNS1P04632 268 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 GPR89BP0CG08 455 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 AK4P27144 223 aaPredicted RBP11.42□□□□□ -0.58
SLIRP-205ENST00000556310 SPAM1P38567 509 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 ACTR1BP42025 376 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 ACTR1AP61163 376 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 HLTFQ14527 1009 aaKnown RBP eCLIP11.42□□□□□ -0.58
SLIRP-205ENST00000556310 PARP6Q2NL67 630 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 SLC30A9Q6PML9 568 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 C17orf82Q86X59 251 aaPredicted RBP11.42□□□□□ -0.58
SLIRP-205ENST00000556310 ZDHHC1Q8WTX9 485 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 TBL1YQ9BQ87 522 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 APOL2Q9BQE5 337 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 CCDC86Q9H6F5 360 aaKnown RBP11.42□□□□□ -0.58
SLIRP-205ENST00000556310 ARNT2Q9HBZ2 717 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 BPIFA1Q9NP55 256 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 SPATS2LQ9NUQ6 558 aaKnown RBP11.42□□□□□ -0.58
SLIRP-205ENST00000556310 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.42□□□□□ -0.58
SLIRP-205ENST00000556310 DKK4Q9UBT3 224 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 FEZ2Q9UHY8 353 aaPredicted RBP11.42□□□□□ -0.58
SLIRP-205ENST00000556310 PKP3Q9Y446 797 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 GPSM3Q9Y4H4 160 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 ST14Q9Y5Y6 855 aa11.42□□□□□ -0.58
SLIRP-205ENST00000556310 TRABD2BA6NFA1 517 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 NUDT21O43809 227 aaKnown RBP11.41□□□□□ -0.58
SLIRP-205ENST00000556310 NUAK1O60285 661 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 USP12O75317 370 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 SLC25A14O95258 325 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-205ENST00000556310 METTL18O95568 372 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 PNLIPP16233 465 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 GLB1P16278 677 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 STIP1P31948 543 aaKnown RBP11.41□□□□□ -0.58
SLIRP-205ENST00000556310 OLIG2Q13516 323 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 TAF1AQ15573 450 aaPredicted RBP11.41□□□□□ -0.58
SLIRP-205ENST00000556310 KCTD11Q693B1 232 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 DENND5AQ6IQ26 1287 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 RBM44Q6ZP01 1051 aaKnown RBP11.41□□□□□ -0.58
SLIRP-205ENST00000556310 SFTPA2Q8IWL1 248 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 C1orf54Q8WWF1 131 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 ANP32BQ92688 251 aaKnown RBP11.41□□□□□ -0.58
SLIRP-205ENST00000556310 NRSN2Q9GZP1 204 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 OR2AG1Q9H205 316 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 LRRC40Q9H9A6 602 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 TRIM39Q9HCM9 518 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 IL26Q9NPH9 171 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 ATXN10Q9UBB4 475 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 ZNHIT2Q9UHR6 403 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 APPL1Q9UKG1 709 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 PLEKHM1Q9Y4G2 1056 aa11.41□□□□□ -0.58
SLIRP-205ENST00000556310 PCYT1BQ9Y5K3 369 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms