RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 ZW10O43264 779 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 OPA1O60313 960 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 AK4P27144 223 aaPredicted RBP11.98□□□□□ -0.49
SRP54-206ENST00000555317 AKT1P31749 480 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 HADHAP40939 763 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 ATP13A5Q4VNC0 1218 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 C14orf28Q4W4Y0 310 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 PYCR3Q53H96 274 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 DRICH1Q6PGQ1 229 aaPredicted RBP11.98□□□□□ -0.49
SRP54-206ENST00000555317 UNQ6494/PRO21346Q6UXR6 183 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 CCNI2Q6ZMN8 369 aaPredicted RBP11.98□□□□□ -0.49
SRP54-206ENST00000555317 CHST15Q7LFX5 561 aaPredicted RBP11.98□□□□□ -0.49
SRP54-206ENST00000555317 OR4K2Q8NGD2 314 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 CCL4L1Q8NHW4 92 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 WDR48Q8TAF3 677 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 PTCD2Q8WV60 388 aaKnown RBP11.98□□□□□ -0.49
SRP54-206ENST00000555317 DEPDC7Q96QD5 511 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 VPS35Q96QK1 796 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 TRIM39Q9HCM9 518 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 IL26Q9NPH9 171 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 RAB6BQ9NRW1 208 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 ATXN10Q9UBB4 475 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 APPL1Q9UKG1 709 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 CLCA2Q9UQC9 943 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 DRG1Q9Y295 367 aaKnown RBP11.98□□□□□ -0.49
SRP54-206ENST00000555317 OAS3Q9Y6K5 1087 aaKnown RBP11.98□□□□□ -0.49
SRP54-206ENST00000555317 U3KQA8 63 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 BPTFQ12830 3046 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 MYLKQ15746 1914 aa11.98□□□□□ -0.49
SRP54-206ENST00000555317 FAM221BA6H8Z2 402 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 RHPN2P1A8MT19 583 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 GRID2O43424 1007 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 VEGFDO43915 354 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 NUAK1O60285 661 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 CDK14O94921 469 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 PRAMEF1O95521 474 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 MT-CO3P00414 261 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 FUCA1P04066 466 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 APRTP07741 180 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 ACP5P13686 325 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 SLC2A4P14672 509 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 ZNF8P17098 575 aaPredicted RBP11.97□□□□□ -0.49
SRP54-206ENST00000555317 VCLP18206 1134 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 ITGALP20701 1170 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 PPM1FP49593 454 aaPredicted RBP11.97□□□□□ -0.49
SRP54-206ENST00000555317 BASP1P80723 227 aaKnown RBP11.97□□□□□ -0.49
SRP54-206ENST00000555317 TMPRSS15P98073 1019 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 INSM1Q01101 510 aaPredicted RBP11.97□□□□□ -0.49
SRP54-206ENST00000555317 CDH17Q12864 832 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 LAMB3Q13751 1172 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 POU6F1Q14863 301 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 SIX1Q15475 284 aaPredicted RBP11.97□□□□□ -0.49
SRP54-206ENST00000555317 CHRNA6Q15825 494 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 INSCQ1MX18 579 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 LDLRAP1Q5SW96 308 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 CERCAMQ5T4B2 595 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 ZNF648Q5T619 568 aaPredicted RBP11.97□□□□□ -0.49
SRP54-206ENST00000555317 KCTD11Q693B1 232 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 CRTC3Q6UUV7 619 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 LRRTM4Q86VH4 590 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 TRAPPC5Q8IUR0 188 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 DTX3LQ8TDB6 740 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 CCDC74AQ96AQ1 378 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 CNTNAP3BQ96NU0 1288 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 CCDC3Q9BQI4 270 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 CNTNAP3Q9BZ76 1288 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 ZMYND15Q9H091 742 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 OSGEPL1Q9H4B0 414 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 STN1Q9H668 368 aaKnown RBP11.97□□□□□ -0.49
SRP54-206ENST00000555317 ETNK1Q9HBU6 452 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 ARNT2Q9HBZ2 717 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 PRKAB1Q9Y478 270 aa11.97□□□□□ -0.49
SRP54-206ENST00000555317 ZNF106Q9H2Y7 1883 aaKnown RBP11.97□□□□□ -0.49
SRP54-206ENST00000555317 PLXNB3Q9ULL4 1909 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 TMEM8BA6NDV4 472 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 KMOO15229 486 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 SNX2O60749 519 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 DNAJC6O75061 913 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 MTX2O75431 263 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 RALBP11234 206 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 ETS1P14921 441 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 GLB1P16278 677 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 TPH1P17752 444 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 MSH3P20585 1137 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 ZNF140P52738 457 aaPredicted RBP11.96□□□□□ -0.49
SRP54-206ENST00000555317 CLDN6P56747 220 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 GNG11P61952 73 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 TARDBPQ13148 414 aaKnown RBP eCLIP11.96□□□□□ -0.49
SRP54-206ENST00000555317 SEMA5AQ13591 1074 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 SPIDRQ14159 915 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 PLA2G4EQ3MJ16 856 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 PERM1Q5SV97 790 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 DENND5AQ6IQ26 1287 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 OGFOD3Q6PK18 319 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 RBM44Q6ZP01 1051 aaKnown RBP11.96□□□□□ -0.49
SRP54-206ENST00000555317 ADGRG6Q86SQ4 1221 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 NRROSQ86YC3 692 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 KLHDC8BQ8IXV7 354 aa11.96□□□□□ -0.49
SRP54-206ENST00000555317 Q8N9G6 341 aaPredicted RBP11.96□□□□□ -0.49
SRP54-206ENST00000555317 GPR156Q8NFN8 814 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms