RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 FAM174AQ8TBP5 190 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OSBPL3Q9H4L5 887 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ACTL8Q9H568 366 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ENY2Q9NPA8 101 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RGS18Q9NS28 235 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MGAT4BQ9UQ53 548 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 FAM149AA5PLN7 773 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 C2orf81A6NN90 581 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 APODP05090 189 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SMIM10L2AP0DMW4 78 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SMIM10L2BP0DMW5 78 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DRD4P21917 467 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 HOXC8P31273 242 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TSPAN5P62079 268 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ARG2P78540 354 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 GALNT1Q10472 559 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ZNHIT3Q15649 155 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DUPD1Q68J44 220 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 VITQ6UXI7 678 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OR52K2Q8NGK3 314 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OR6Q1Q8NGQ2 317 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MMABQ96EY8 250 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SLC5A7Q9GZV3 580 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ARHGAP28Q9P2N2 729 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OAS3Q9Y6K5 1087 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CCNE1P24864 410 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PIK3R1P27986 724 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 GMPRP36959 345 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TRADDQ15628 312 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ENPP7Q6UWV6 458 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CASP12Q6UXS9 341 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SP8Q8IXZ3 490 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CHST13Q8NET6 341 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OR2AJ1Q8NGZ0 328 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OR2L2Q8NH16 312 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DCAF4Q8WV16 495 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CMTM5Q96DZ9 223 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PIGUQ9H490 435 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ATP13A3Q9H7F0 1226 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PCDHB10Q9UN67 800 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 GABRQQ9UN88 632 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RGPD8O14715 1765 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 C5orf51A6NDU8 294 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MANSC4A6NHS7 340 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 LRRN3E7EW58 273 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RAMP2O60895 175 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TXNDC12O95881 172 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PAICSP22234 425 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PTGER2P43116 358 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SLC9A3P48764 834 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 KCNA10Q16322 511 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DEFB110Q30KQ9 67 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PDCD4Q53EL6 469 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 HECTD2Q5U5R9 776 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 C4orf22Q6V702 233 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 OR4A15Q8NGL6 344 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 HERVK_113Q902F9 699 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MAP3K3Q99759 626 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 BLOC1S6Q9UL45 172 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MTO1Q9Y2Z2 717 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 A0A1W2PPK0 400 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SRRM3A6NNA2 597 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 RARGP13631 454 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 NRIP1P48552 1158 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TAF6P49848 677 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CUL2Q13617 745 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MFSD13AQ14CX5 517 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 NDUFAF6Q330K2 333 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 GLT6D1Q7Z4J2 308 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CLVS1Q8IUQ0 354 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CERS2Q96G23 380 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 KIAA1522Q9P206 1035 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 ST3GAL5Q9UNP4 418 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 U3KQV3 271 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 L7N2F9 121 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PCDHGA12O60330 932 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PRMT3O60678 531 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 VIPP01282 170 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 FGBP02675 491 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CYP17A1P05093 508 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 INHAP05111 366 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 C4BPBP20851 252 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SLC1A6P48664 564 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CCT8P50990 548 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 VAMP2P63027 116 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 GPM6BQ13491 265 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 DUOXA2Q1HG44 320 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 PDZK1Q5T2W1 519 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CHST9Q7L1S5 443 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 SLC2A14Q8TDB8 520 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TPPP3Q9BW30 176 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 MAN2C1Q9NTJ4 1040 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 TUBGCP4Q9UGJ1 667 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CDY1Q9Y6F8 540 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 A3GALT2U3KPV4 340 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 GPATCH8Q9UKJ3 1502 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 FAM205AQ6ZU69 1335 aa3.29□□□□□ -1.88
SYNE2-212ENST00000554584 YLPM1P49750 1951 aaKnown RBP3.29□□□□□ -1.88
SYNE2-212ENST00000554584 CHD5Q8TDI0 1954 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms