RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ZNF263O14978 683 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 EPHB6O15197 1021 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 MED24O75448 989 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 GOSR1O95249 250 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 HOXC6P09630 235 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 MMP8P22894 467 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 IL4RP24394 825 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 THBS4P35443 961 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 HADHAP40939 763 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 MTIF2P46199 727 aaKnown RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 AARSP49588 968 aaKnown RBP eCLIP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 SLC12A2P55011 1212 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 POLR2FP61218 127 aaKnown RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 CYP4F2P78329 520 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 ZXDAP98168 799 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 PPARDQ03181 441 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 LRRC63Q05C16 580 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 DNASE1L3Q13609 305 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 GRB14Q14449 540 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 COG2Q14746 738 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 WHAMMP3Q1A5X7 153 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 TMEM266Q2M3C6 531 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 TRIM60Q495X7 471 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 RNASE12Q5GAN4 147 aaKnown RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 KIAA1755Q5JYT7 1200 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 TEX35Q5T0J7 233 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 PAPD7Q5XG87 772 aaKnown RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 KRT79Q5XKE5 535 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 MOXD1Q6UVY6 613 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 KDELC1Q6UW63 502 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 B4GALNT4Q76KP1 1039 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 Q7L0L9 218 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 TRAPPC11Q7Z392 1133 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 GRASPQ7Z6J2 395 aaPredicted RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 SFTPA1Q8IWL2 248 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 CCDC170Q8IYT3 715 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 ZNF619Q8N2I2 560 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 DEFB123Q8N688 67 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 TMCO5AQ8N6Q1 288 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 CEP112Q8N8E3 955 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 GMCL1P1Q8NEA9 526 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 TRPV1Q8NER1 839 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 ETNPPLQ8TBG4 499 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 CPT1BQ92523 772 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 LPAR1Q92633 364 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 RBM18Q96H35 190 aaKnown RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 TWNKQ96RR1 684 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 DDX23Q9BUQ8 820 aaKnown RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 MOV10L1Q9BXT6 1211 aaKnown RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 FUT8Q9BYC5 575 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 FGFBP2Q9BYJ0 223 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 CIPCQ9C0C6 399 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 GLT8D2Q9H1C3 349 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 OR10A4Q9H209 315 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 NDST4Q9H3R1 872 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 HAUS4Q9H6D7 363 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 NHEJ1Q9H9Q4 299 aaPredicted RBP5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 CPNE5Q9HCH3 593 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 RPS6KA6Q9UK32 745 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 PCDHA12Q9UN75 941 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 TFR2Q9UP52 801 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 PCDHGB5Q9Y5G0 923 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 SNX8Q9Y5X2 465 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 LTBP2Q14767 1821 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 ZNF236Q9UL36 1845 aa5.32□□□□□ -1.56
MTHFD1-206ENST00000554353 KDM3AQ9Y4C1 1321 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 CCDC187A0A096LP49 1063 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 F5H6K3 240 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 DNM1LO00429 736 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 AP3D1O14617 1153 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 STRNO43815 780 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 PRAMEF2O60811 474 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 NOL4O94818 638 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 LCA5LO95447 670 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 FGFR1OPO95684 399 aaKnown RBP5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 NDUFB10O96000 172 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 TK1P04183 234 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 PLEKP08567 350 aaPredicted RBP5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 CYP3A4P08684 503 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 PLA2G4BP0C869 781 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 PEPDP12955 493 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 CYP11B2P19099 503 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 IL11P20809 199 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 CIITAP33076 1130 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 HOXD13P35453 343 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 SLC1A4P43007 532 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 SLC12A3P55017 1021 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 SNAP25P60880 206 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 RAE1P78406 368 aaKnown RBP5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 KLRC3Q07444 240 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 CBFBQ13951 182 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 FHL2Q14192 279 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 ASTE1Q2TB18 679 aaPredicted RBP5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 LRIT3Q3SXY7 679 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 ANKDD1AQ495B1 522 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 Q4G0T1 1027 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 PRAMEF19Q5SWL8 479 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 RAB12Q6IQ22 244 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 DPY19L2P1Q6NXN4 242 aa5.31□□□□□ -1.56
MTHFD1-206ENST00000554353 CCBE1Q6UXH8 406 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms