RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RMI1Q9H9A7 625 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 ARGLU1Q9NWB6 273 aaPredicted RBP12.96□□□□□ -0.33
SHMT2-211ENST00000554310 TAAR2Q9P1P5 351 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 CNOT6Q9ULM6 557 aaKnown RBP12.96□□□□□ -0.33
SHMT2-211ENST00000554310 SNX12Q9UMY4 172 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 TMEM98Q9Y2Y6 226 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 SPO11Q9Y5K1 396 aa12.96□□□□□ -0.33
SHMT2-211ENST00000554310 DMXL2Q8TDJ6 3036 aa12.96□□□□□ -0.34
SHMT2-211ENST00000554310 DSPP15924 2871 aaKnown RBP12.95□□□□□ -0.34
SHMT2-211ENST00000554310 SRRM3A6NNA2 597 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-211ENST00000554310 GPR89AB7ZAQ6 455 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 NUDT21O43809 227 aaKnown RBP12.95□□□□□ -0.34
SHMT2-211ENST00000554310 ASMTLO95671 621 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 GPR89BP0CG08 455 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 PNLIPP16233 465 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 GLB1P16278 677 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 BPIP17213 487 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 TCP1P17987 556 aaKnown RBP12.95□□□□□ -0.34
SHMT2-211ENST00000554310 CHRNA4P43681 627 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 CYP4F3Q08477 520 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 SPIDRQ14159 915 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 HLTFQ14527 1009 aaKnown RBP eCLIP12.95□□□□□ -0.34
SHMT2-211ENST00000554310 PRPSAP1Q14558 356 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 SLC1A5Q15758 541 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 ISXQ2M1V0 245 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 ANKRD20A2Q5SQ80 823 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 SEL1L2Q5TEA6 688 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 ANKRD20A1Q5TYW2 823 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 ANKRD20A3Q5VUR7 823 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 ALS2CLQ60I27 953 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 SLC30A9Q6PML9 568 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 MARK2Q7KZI7 788 aaKnown RBP12.95□□□□□ -0.34
SHMT2-211ENST00000554310 C17orf82Q86X59 251 aaPredicted RBP12.95□□□□□ -0.34
SHMT2-211ENST00000554310 PHYKPLQ8IUZ5 450 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 GPR26Q8NDV2 337 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 DTX3LQ8TDB6 740 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 FAM118BQ9BPY3 351 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 GORASP1Q9BQQ3 440 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 APPL1Q9UKG1 709 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 AAR2Q9Y312 384 aaKnown RBP12.95□□□□□ -0.34
SHMT2-211ENST00000554310 GPSM3Q9Y4H4 160 aa12.95□□□□□ -0.34
SHMT2-211ENST00000554310 D6RAR5 112 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 NTN3O00634 580 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-211ENST00000554310 AURKAO14965 403 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 DNAJC6O75061 913 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 PPFIA2O75334 1257 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 RPLP0P05388 317 aaKnown RBP12.94□□□□□ -0.34
SHMT2-211ENST00000554310 TUBBP07437 444 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 AK4P27144 223 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-211ENST00000554310 PSMB4P28070 264 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 ACTR1BP42025 376 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 ACTR1AP61163 376 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 ZNF572Q7Z3I7 529 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-211ENST00000554310 GLT6D1Q7Z4J2 308 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 TTC30BQ8N4P2 665 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 SLC25A41Q8N5S1 370 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 SLC35B2Q8TB61 432 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 CCDC110Q8TBZ0 833 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 BLOC1S5Q8TDH9 187 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 ZDHHC1Q8WTX9 485 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 GLYATL1Q969I3 302 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 LRRC45Q96CN5 670 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 VPS35Q96QK1 796 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 FICDQ9BVA6 458 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 FRMD8P1Q9BZ68 369 aaPredicted RBP12.94□□□□□ -0.34
SHMT2-211ENST00000554310 CARD9Q9H257 536 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 SYNDIG1Q9H7V2 258 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 SPATS2LQ9NUQ6 558 aaKnown RBP12.94□□□□□ -0.34
SHMT2-211ENST00000554310 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.94□□□□□ -0.34
SHMT2-211ENST00000554310 RABGEF1Q9UJ41 708 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 PCDHB1Q9Y5F3 818 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 OAS3Q9Y6K5 1087 aaKnown RBP12.94□□□□□ -0.34
SHMT2-211ENST00000554310 AK5Q9Y6K8 562 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 ITPR1Q14643 2758 aa12.94□□□□□ -0.34
SHMT2-211ENST00000554310 C5orf60A6NFR6 353 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 TAF4O00268 1085 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 SLC25A14O95258 325 aaPredicted RBP12.93□□□□□ -0.34
SHMT2-211ENST00000554310 ADRA1AP35348 466 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 SPAM1P38567 509 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 PDX1P52945 283 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 P3H1Q32P28 736 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 ARHGEF18Q6ZSZ5 1173 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 ZNF438Q7Z4V0 828 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 SPRED1Q7Z699 444 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 CCNJLQ8IV13 435 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 SFTPA2Q8IWL1 248 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 KLHDC8BQ8IXV7 354 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 GFM1Q96RP9 751 aaKnown RBP12.93□□□□□ -0.34
SHMT2-211ENST00000554310 TRIM39Q9HCM9 518 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 LRIT1Q9P2V4 623 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 R3HDM2Q9Y2K5 976 aaKnown RBP12.93□□□□□ -0.34
SHMT2-211ENST00000554310 ST14Q9Y5Y6 855 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 RNF215Q9Y6U7 377 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 URB1O60287 2271 aaKnown RBP12.93□□□□□ -0.34
SHMT2-211ENST00000554310 UNC13CQ8NB66 2214 aa12.93□□□□□ -0.34
SHMT2-211ENST00000554310 A0A1W2PQM1 296 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 ZW10O43264 779 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 VEGFDO43915 354 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 NUAK1O60285 661 aa12.92□□□□□ -0.34
SHMT2-211ENST00000554310 BRINP1O60477 761 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms