RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 DTX3LQ8TDB6 740 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 ACTRT1Q8TDG2 376 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 GPBAR1Q8TDU6 330 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 SCARF2Q96GP6 870 aaPredicted RBP18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 TTC25Q96NG3 672 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 NAPGQ99747 312 aaPredicted RBP18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 TRIM39Q9HCM9 518 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 PIH1D1Q9NWS0 290 aaKnown RBP18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 FKBPLQ9UIM3 349 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 APPL1Q9UKG1 709 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 PADI4Q9UM07 663 aa18.3■□□□□ 0.52
PRPF40B-216ENST00000552301 LY6G6EA0A0G2JKS1 128 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 CTAGE9A4FU28 777 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 TOP3BO95985 862 aaKnown RBP18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 FUCA1P04066 466 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 GP1BAP07359 652 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 AK4P27144 223 aaPredicted RBP18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 ZNF140P52738 457 aaPredicted RBP18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 CTBSQ01459 385 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 BIRC2Q13490 618 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 PTPRCAPQ14761 206 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 LDLRAP1Q5SW96 308 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 GUSBP11Q6P575 273 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 OR52K1Q8NGK4 314 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 ABCG4Q9H172 646 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 SMARCAL1Q9NZC9 954 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 TAAR2Q9P1P5 351 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 ATXN10Q9UBB4 475 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 NEUROG3Q9Y4Z2 214 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 KCTD3Q9Y597 815 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 U3KQA8 63 aa18.29■□□□□ 0.52
PRPF40B-216ENST00000552301 GRID2O43424 1007 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 VEGFDO43915 354 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 NUAK1O60285 661 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 DNAJC6O75061 913 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 MTX2O75431 263 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 SUN1O94901 812 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 ZNF8P17098 575 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 ITGALP20701 1170 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 VPS41P49754 854 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 TMPRSS15P98073 1019 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 LAMB3Q13751 1172 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 ZNF648Q5T619 568 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 CRTC3Q6UUV7 619 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 CHST15Q7LFX5 561 aaPredicted RBP18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 OR6C4Q8NGE1 309 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 OR13C4Q8NGS5 318 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 MAPK15Q8TD08 544 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 ZNF398Q8TD17 642 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 GRK7Q8WTQ7 553 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 ZDHHC1Q8WTX9 485 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 ASB8Q9H765 288 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 EIF2B3Q9NR50 452 aaKnown RBP18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 CRLS1Q9UJA2 301 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 KLK13Q9UKR3 277 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 PRKAB1Q9Y478 270 aa18.28■□□□□ 0.52
PRPF40B-216ENST00000552301 ARHGEF17Q96PE2 2063 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 EME2A4GXA9 379 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 ZNF185O15231 689 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 LDB2O43679 373 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 UGT1A9O60656 530 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 PHF2O75151 1096 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 SRP72O76094 671 aaKnown RBP18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 CDK14O94921 469 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 ACP5P13686 325 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 UGT1A6P19224 532 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 UGT1A1P22309 533 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 UGT1A4P22310 534 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 AKT1P31749 480 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 UGT1A3P35503 534 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 UGT1A5P35504 534 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 COILP38432 576 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 MSLNQ13421 630 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 TRIP13Q15645 432 aaPredicted RBP18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 CYP1B1Q16678 543 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 INSCQ1MX18 579 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 HES3Q5TGS1 186 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 CCDC137Q6PK04 289 aaKnown RBP18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 TMPRSS7Q7RTY8 843 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 ADGRG6Q86SQ4 1221 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 LRRTM4Q86VH4 590 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 TMPRSS12Q86WS5 348 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 NRROSQ86YC3 692 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 ULK4Q96C45 1275 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 DNAJC1Q96KC8 554 aaKnown RBP18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 C19orf43Q9BQ61 176 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 SYNDIG1Q9H7V2 258 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 UGT1A7Q9HAW7 530 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 UGT1A10Q9HAW8 530 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 UGT1A8Q9HAW9 530 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 SMOXQ9NWM0 555 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 SLC30A1Q9Y6M5 507 aa18.27■□□□□ 0.52
PRPF40B-216ENST00000552301 HEATR9A2RTY3 570 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 GPR39O43194 453 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 KRT14P02533 472 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 JUPP14923 745 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 MSH3P20585 1137 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 FNTAP49354 379 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 GPS1Q13098 491 aa18.26■□□□□ 0.51
PRPF40B-216ENST00000552301 SMAD1Q15797 465 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms