RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 PNLIPP16233 465 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 ADRA1AP35348 466 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 SPAM1P38567 509 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 MAZP56270 477 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 ISXQ2M1V0 245 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 RANBP10Q6VN20 620 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 SLC13A5Q86YT5 568 aaPredicted RBP17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 GRAMD1AQ96CP6 724 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 VPS35Q96QK1 796 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 GFM1Q96RP9 751 aaKnown RBP17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 TBL1YQ9BQ87 522 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 APOL2Q9BQE5 337 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 TMEM121Q9BTD3 319 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 OR2AG1Q9H205 316 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 IL17CQ9P0M4 197 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 PPP2R2CQ9Y2T4 447 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 PRKAB1Q9Y478 270 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 AK5Q9Y6K8 562 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 RNF215Q9Y6U7 377 aa17.06■□□□□ 0.32
CHMP1A-208ENST00000550102 SRRM3A6NNA2 597 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 NTN3O00634 580 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 NUAK1O60285 661 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 ACP5P13686 325 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 BIRC2Q13490 618 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 PARP6Q2NL67 630 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 FAM151BQ6UXP7 276 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 CHST15Q7LFX5 561 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 SPRED1Q7Z699 444 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 C17orf82Q86X59 251 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 KLHDC8BQ8IXV7 354 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 TRIM39Q9HCM9 518 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 ARFGAP3Q9NP61 516 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 IL26Q9NPH9 171 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 LRIT1Q9P2V4 623 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 ATXN10Q9UBB4 475 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 FEZ2Q9UHY8 353 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 PLEKHM1Q9Y4G2 1056 aa17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 PCYT1BQ9Y5K3 369 aaPredicted RBP17.05■□□□□ 0.32
CHMP1A-208ENST00000550102 GLYATL1P3A0A0U1RQE8 302 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 C2orf81A6NN90 581 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 RHPN2P1A8MT19 583 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 STX7O15400 261 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 GRID2O43424 1007 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 LIASO43766 372 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 VEGFDO43915 354 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 USP12O75317 370 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 ECEL1O95672 775 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 ZNF8P17098 575 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 LPOP22079 712 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 GDF10P55107 478 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 CCL7P80098 99 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 OLIG2Q13516 323 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 ITGA9Q13797 1035 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 TAF1AQ15573 450 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 ATP13A5Q4VNC0 1218 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 CRTC3Q6UUV7 619 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 ZNF438Q7Z4V0 828 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 ADGRG6Q86SQ4 1221 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 NAGSQ8N159 534 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 Q8N9G6 341 aaPredicted RBP17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 GDAP1Q8TB36 358 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 DTX3LQ8TDB6 740 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 PATE1Q8WXA2 126 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 RTP4Q96DX8 246 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 ZCCHC2Q9C0B9 1178 aaKnown RBP17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 LRRC40Q9H9A6 602 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 KCNK6Q9Y257 313 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 ARL5AQ9Y689 179 aa17.04■□□□□ 0.32
CHMP1A-208ENST00000550102 TAF4O00268 1085 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 CASC3O15234 703 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 ZW10O43264 779 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 BUD23O43709 281 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 BRINP1O60477 761 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 CRTAMO95727 393 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 PDX1P52945 283 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 GABREP78334 506 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 PDE1BQ01064 536 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 OASLQ15646 514 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 ZNF648Q5T619 568 aaPredicted RBP17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 ARL14Q8N4G2 192 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 ATXN7L3BQ96GX2 97 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 LRRN3Q9H3W5 708 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 ARNT2Q9HBZ2 717 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 RAXQ9Y2V3 346 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 ENTPD2Q9Y5L3 495 aa17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 URB1O60287 2271 aaKnown RBP17.03■□□□□ 0.32
CHMP1A-208ENST00000550102 A0A1W2PQM1 296 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 CHUKO15111 745 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 MTX2O75431 263 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 KRT37O76014 449 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 PRAMEF1O95521 474 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 METTL18O95568 372 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 MPOP05164 745 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 SLC2A4P14672 509 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 STIP1P31948 543 aaKnown RBP17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 GTF2H3Q13889 308 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 SPARCL1Q14515 664 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 NR1D2Q14995 579 aa17.02■□□□□ 0.32
CHMP1A-208ENST00000550102 CHRNA6Q15825 494 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms