RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 LCTLQ6UWM7 567 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 C17orf99Q6UX52 265 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 SLC36A4Q6YBV0 504 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 ZNF852Q6ZMS4 543 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 ZNF497Q6ZNH5 498 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 KCTD8Q6ZWB6 473 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 FOXRED2Q8IWF2 684 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 CADM4Q8NFZ8 388 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 DUSP19Q8WTR2 217 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 PPM1EQ8WY54 764 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 TWNKQ96RR1 684 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 STN1Q9H668 368 aaKnown RBP3.84□□□□□ -1.79
CNOT2-216ENST00000548939 FKRPQ9H9S5 495 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 KIF17Q9P2E2 1029 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 HACL1Q9UJ83 578 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 RCOR1Q9UKL0 485 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 CARD8Q9Y2G2 431 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 DNAJC16Q9Y2G8 782 aa3.84□□□□□ -1.79
CNOT2-216ENST00000548939 RRP7AQ9Y3A4 280 aaKnown RBP3.84□□□□□ -1.79
CNOT2-216ENST00000548939 LTBP1Q14766 1721 aa3.84□□□□□ -1.8
CNOT2-216ENST00000548939 BRCA1P38398 1863 aaKnown RBP3.84□□□□□ -1.8
CNOT2-216ENST00000548939 UBR3Q6ZT12 1888 aa3.84□□□□□ -1.8
CNOT2-216ENST00000548939 COL6A3P12111 3177 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 F5H423 210 aaPredicted RBP3.83□□□□□ -1.8
CNOT2-216ENST00000548939 PEX12O00623 359 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 G6PDP11413 515 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 PAX1P15863 534 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 RXRAP19793 462 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 S1PR1P21453 382 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 EPHX2P34913 555 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 DRG2P55039 364 aaKnown RBP3.83□□□□□ -1.8
CNOT2-216ENST00000548939 CHRNDQ07001 517 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 GPATCH4Q5T3I0 446 aaKnown RBP3.83□□□□□ -1.8
CNOT2-216ENST00000548939 STXBP5Q5T5C0 1151 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 SLC35E4Q6ICL7 350 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 LRRC8EQ6NSJ5 796 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 CEACAM20Q6UY09 585 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 TAOK1Q7L7X3 1001 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 RNF113BQ8IZP6 322 aaKnown RBP3.83□□□□□ -1.8
CNOT2-216ENST00000548939 C1orf87Q8N0U7 546 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 POF1BQ8WVV4 589 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 ZNF524Q96C55 264 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 C17orf77Q96MU5 243 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 SIN3AQ96ST3 1273 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 NUF2Q9BZD4 464 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 KDM6AO15550 1401 aaPredicted RBP3.83□□□□□ -1.8
CNOT2-216ENST00000548939 QRICH2Q9H0J4 1663 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 C4AP0C0L4 1744 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 TOGARAM1Q9Y4F4 1720 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 TAF1LQ8IZX4 1826 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 CCDC88AQ3V6T2 1871 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 CEP290O15078 2479 aa3.83□□□□□ -1.8
CNOT2-216ENST00000548939 RNF123Q5XPI4 1314 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 GOLGA6L9A6NEM1 432 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 FAM90A7PA6NKC0 464 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 FAM90A22PA8MWA6 464 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 FAM90A12PA8MX19 464 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 FAM90A23PA8MXZ1 464 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 ETFAP13804 333 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 EIF2S3P41091 472 aaKnown RBP3.82□□□□□ -1.8
CNOT2-216ENST00000548939 HTR3AP46098 478 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 HOXA1P49639 335 aaPredicted RBP3.82□□□□□ -1.8
CNOT2-216ENST00000548939 TERF1P54274 439 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 NAA25Q14CX7 972 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 MAP9Q49MG5 647 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 ZC2HC1BQ5TFG8 222 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 ANKRD54Q6NXT1 300 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 MTSS1LQ765P7 747 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 NOXA1Q86UR1 476 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 FAM160B2Q86V87 743 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 C2CD5Q86YS7 1000 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 ZNF34Q8IZ26 560 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 ADAD2Q8NCV1 583 aaKnown RBP3.82□□□□□ -1.8
CNOT2-216ENST00000548939 KLHDC9Q8NEP7 349 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 CEP70Q8NHQ1 597 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 ZNF622Q969S3 477 aaKnown RBP eCLIP3.82□□□□□ -1.84e-6■□□□□ 8.8
CNOT2-216ENST00000548939 FBXL8Q96CD0 374 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 CD180Q99467 661 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 PAGR1Q9BTK6 254 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 TAOK3Q9H2K8 898 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 MROH8Q9H579 483 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 DDX4Q9NQI0 724 aaKnown RBP3.82□□□□□ -1.8
CNOT2-216ENST00000548939 HCFC1R1Q9NWW0 138 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 ALKBH4Q9NXW9 302 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 KCNK7Q9Y2U2 307 aa3.82□□□□□ -1.8
CNOT2-216ENST00000548939 MKI67P46013 3256 aaKnown RBP3.82□□□□□ -1.8
CNOT2-216ENST00000548939 TTC21BQ7Z4L5 1316 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 SH2D7A6NKC9 451 aaPredicted RBP3.81□□□□□ -1.8
CNOT2-216ENST00000548939 H0YIN7 160 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 PLIN1O60240 522 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 CELF2O95319 508 aaKnown RBP3.81□□□□□ -1.8
CNOT2-216ENST00000548939 MMP2P08253 660 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 INHBAP08476 426 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 KRT2P35908 639 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 ITPK1Q13572 414 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 KRT24Q2M2I5 525 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 CCNYL2Q5T2Q4 361 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 SRBD1Q8N5C6 995 aaKnown RBP3.81□□□□□ -1.8
CNOT2-216ENST00000548939 MAPK1IP1LQ8NDC0 245 aa3.81□□□□□ -1.8
CNOT2-216ENST00000548939 PIGBQ92521 554 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms