RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SKA1Q96BD8 255 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 MRRFQ96E11 262 aaKnown RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 HIC2Q96JB3 615 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 TCF12Q99081 682 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 COPS8Q99627 209 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 CPNE1Q99829 537 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 DUSP15Q9H1R2 295 aaPredicted RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 PPCSQ9HAB8 311 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 UGT1A7Q9HAW7 530 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 UGT1A10Q9HAW8 530 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 UGT1A8Q9HAW9 530 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 C11orf16Q9NQ32 467 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 INTS10Q9NVR2 710 aaKnown RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 SMOXQ9NWM0 555 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 MOCS1Q9NZB8 636 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 EIF2B4Q9UI10 523 aaKnown RBP11.8□□□□□ -0.52
DDB1-223ENST00000543658 RABGEF1Q9UJ41 708 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 FBXO5Q9UKT4 447 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 RAB23Q9ULC3 237 aa11.8□□□□□ -0.52
DDB1-223ENST00000543658 RALGAPA1Q6GYQ0 2036 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 FADS2P1A8MWK0 482 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 GAPDHSO14556 408 aaPredicted RBP11.79□□□□□ -0.52
DDB1-223ENST00000543658 GPR39O43194 453 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 MAGEC1O60732 1142 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 GNSP15586 552 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 GP5P40197 560 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 DPP6P42658 865 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 MSH2P43246 934 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 RABIFP47224 123 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 EIF3BP55884 814 aaKnown RBP11.79□□□□□ -0.52
DDB1-223ENST00000543658 CDK3Q00526 305 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 SRSF5Q13243 272 aaKnown RBP11.79□□□□□ -0.52
DDB1-223ENST00000543658 CTBP1Q13363 440 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 SIM2Q14190 667 aaPredicted RBP11.79□□□□□ -0.52
DDB1-223ENST00000543658 PTK2BQ14289 1009 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 INPP5AQ14642 412 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 EFTUD2Q15029 972 aaKnown RBP eCLIP11.79□□□□□ -0.526e-7■■■■□ 19.4
DDB1-223ENST00000543658 TYSND1Q2T9J0 566 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 GPRC6AQ5T6X5 926 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 TEDDM1Q5T9Z0 273 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 PMS2CLQ68D20 193 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 ADAMTSL4Q6UY14 1074 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 KYAT3Q6YP21 454 aaKnown RBP11.79□□□□□ -0.52
DDB1-223ENST00000543658 MARK2Q7KZI7 788 aaKnown RBP11.79□□□□□ -0.52
DDB1-223ENST00000543658 HDXQ7Z353 690 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 STRA8Q7Z7C7 330 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 DENND6AQ8IWF6 608 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 CNTN4Q8IWV2 1026 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 CNPY4Q8N129 248 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 PLA2G15Q8NCC3 412 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 C2CD4AQ8NCU7 369 aaPredicted RBP11.79□□□□□ -0.52
DDB1-223ENST00000543658 DDHD1Q8NEL9 900 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 CENPTQ96BT3 561 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 PAFAH2Q99487 392 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 AGAP2Q99490 1192 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 APOOQ9BUR5 198 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 TSSK1BQ9BXA7 367 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 FUT8Q9BYC5 575 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 CLPBQ9H078 707 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 ACBD3Q9H3P7 528 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 PLAC1Q9HBJ0 212 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 MBNL1Q9NR56 388 aaKnown RBP11.79□□□□□ -0.52
DDB1-223ENST00000543658 FBXO6Q9NRD1 293 aaPredicted RBP11.79□□□□□ -0.52
DDB1-223ENST00000543658 ZDHHC3Q9NYG2 299 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 SUSD2Q9UGT4 822 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 GNPTGQ9UJJ9 305 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 PLAAQ9Y263 795 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 HS3ST3A1Q9Y663 406 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 LRP4O75096 1905 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 VCANP13611 3396 aa11.79□□□□□ -0.52
DDB1-223ENST00000543658 TRBV5-4A0A0C4DH59 114 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 GOLGA6L10A6NI86 522 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 K7ESM1 405 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 QSOX1O00391 747 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 DYNC1I1O14576 645 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 RAD51BO15315 384 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 NUDT17P0C025 328 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 PRSS56P0CW18 603 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 MYCLP1P12525 358 aaPredicted RBP11.78□□□□□ -0.52
DDB1-223ENST00000543658 SPRP35270 261 aaPredicted RBP11.78□□□□□ -0.52
DDB1-223ENST00000543658 NSG1P42857 185 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 PTGER3P43115 390 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 CD151P48509 253 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 CDKN1CP49918 316 aaPredicted RBP11.78□□□□□ -0.52
DDB1-223ENST00000543658 SERPINB9P50453 376 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 CSE1LP55060 971 aaKnown RBP11.78□□□□□ -0.52
DDB1-223ENST00000543658 CLDN2P57739 230 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 YPEL5P62699 121 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 MPP1Q00013 466 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 SEMA3AQ14563 771 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 TEAD4Q15561 434 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 DBN1Q16643 649 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 UBAP2Q5T6F2 1119 aaKnown RBP11.78□□□□□ -0.52
DDB1-223ENST00000543658 GRTP1Q5TC63 336 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 LGSNQ5TDP6 509 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 PTRHD1Q6GMV3 140 aaKnown RBP11.78□□□□□ -0.52
DDB1-223ENST00000543658 DOK6Q6PKX4 331 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 GCNT7Q6ZNI0 430 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 CROCCP2Q86T23 111 aa11.78□□□□□ -0.52
DDB1-223ENST00000543658 LDB1Q86U70 411 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms