RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, human

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN6-219	ENST00000542848	FAM228B	P0C875	321 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	F3	P13726	295 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	MX2	P20592	715 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	CCR10	P46092	362 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	PPM1F	P49593	454 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	CLCNKA	P51800	687 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	ZBED6	P86452	979 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	NIPAL4	Q0D2K0	466 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	KCNAB2	Q13303	367 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	KIR2DS5	Q14953	304 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	ATP13A4	Q4VNC1	1196 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	HENMT1	Q5T8I9	393 aa	Known RBP	11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	ALKBH5	Q6P6C2	394 aa	Known RBP	11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	LYSMD3	Q7Z3D4	306 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	NLGN4X	Q8N0W4	816 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	AVL9	Q8NBF6	648 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	LPCAT1	Q8NF37	534 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	CCHCR1	Q8TD31	782 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	NCSTN	Q92542	709 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	RTP4	Q96DX8	246 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	IQCD	Q96DY2	449 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	SLC45A3	Q96JT2	553 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	MLPH	Q9BV36	600 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	TRIM5	Q9C035	493 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	TRIM4	Q9C037	500 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	TRIT1	Q9H3H1	467 aa	Known RBP	11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	PKD2L2	Q9NZM6	624 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	TBC1D29	Q9UFV1	150 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	TTLL3	Q9Y4R7	772 aa		11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	PCYT1B	Q9Y5K3	369 aa	Predicted RBP	11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848	OAS3	Q9Y6K5	1087 aa	Known RBP	11.74	□□□□□ -0.53
PTPN6-219	ENST00000542848		A6NCN8	305 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848		A8MU76	341 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	FADS2P1	A8MWK0	482 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	GRID2	O43424	1007 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	NUAK1	O60285	661 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	HLA-DQB2	P05538	268 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	PBX1	P40424	430 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	POLE2	P56282	527 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	NFATC2	Q13469	925 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	QPCT	Q16769	361 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	SNAP47	Q5SQN1	464 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	CCDC13	Q8IYE1	715 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	ZNF564	Q8TBZ8	553 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	FAF2	Q96CS3	445 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	HDAC11	Q96DB2	347 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	ADGRE3	Q9BY15	652 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	CARD9	Q9H257	536 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	LCMT1	Q9UIC8	334 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	CAPN11	Q9UMQ6	739 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	KCNK6	Q9Y257	313 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	PRKAB1	Q9Y478	270 aa		11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	TMEM184B	Q9Y519	407 aa	Predicted RBP	11.73	□□□□□ -0.53
PTPN6-219	ENST00000542848	GPR89A	B7ZAQ6	455 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	NKX2-8	O15522	239 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	PROSC	O94903	275 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	MMP2	P08253	660 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	KRT7	P08729	469 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	GPR89B	P0CG08	455 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	ACP5	P13686	325 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	ZNF75D	P51815	510 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	ABHD18	Q0P651	414 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	SLC10A2	Q12908	348 aa	Predicted RBP	11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	CRTC2	Q53ET0	693 aa	Predicted RBP	11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	PLXDC1	Q8IUK5	500 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	PQLC3	Q8N755	202 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	CCNY	Q8ND76	341 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	CPLX3	Q8WVH0	158 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	CTRC	Q99895	268 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	UCK1	Q9HA47	277 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	TRIM39	Q9HCM9	518 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	UVRAG	Q9P2Y5	699 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	ATXN10	Q9UBB4	475 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	CPNE7	Q9UBL6	633 aa		11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	LUC7L2	Q9Y383	392 aa	Known RBP	11.72	□□□□□ -0.53
PTPN6-219	ENST00000542848	MN1	Q10571	1320 aa	Predicted RBP	11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	LOC101059948	A0A1B0GTJ6	334 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	LILRA5	A6NI73	299 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	POLR1C	O15160	346 aa	Predicted RBP	11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	SNX2	O60749	519 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	JCHAIN	P01591	159 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	ANKRD34C	P0C6C1	535 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	ZNF8	P17098	575 aa	Predicted RBP	11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	XRCC1	P18887	633 aa	Predicted RBP	11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	GJC1	P36383	396 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	CD86	P42081	329 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	UBASH3A	P57075	661 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	TAS2R40	P59535	323 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	FANCC	Q00597	558 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	MC1R	Q01726	317 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	GBE1	Q04446	702 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	TLE1	Q04724	770 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	PPID	Q08752	370 aa	Known RBP	11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	MAP7	Q14244	749 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	PDPK2P	Q6A1A2	396 aa		11.71	□□□□□ -0.53
PTPN6-219	ENST00000542848	TIPARP	Q7Z3E1	657 aa	Known RBP	11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms