RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 C6orf141Q5SZD1 244 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 NUGGCQ68CJ6 796 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 LRRC8EQ6NSJ5 796 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 ZNF517Q6ZMY9 492 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-217ENST00000541578 EPHX4Q8IUS5 362 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 ARID3BQ8IVW6 561 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-217ENST00000541578 HACE1Q8IYU2 909 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 CADM3Q8N126 398 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 CHCHD4Q8N4Q1 142 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 MINDY1Q8N5J2 469 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 TDRD5Q8NAT2 981 aaKnown RBP4.28□□□□□ -1.72
SNHG1-217ENST00000541578 GJC3Q8NFK1 279 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 CMASQ8NFW8 434 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-217ENST00000541578 GOT1L1Q8NHS2 421 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-217ENST00000541578 FBXL8Q96CD0 374 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 ZNF570Q96NI8 536 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 DGAT2Q96PD7 388 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 GAD1Q99259 594 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 HGH1Q9BTY7 390 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 GLIS2Q9BZE0 524 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-217ENST00000541578 MOV10Q9HCE1 1003 aaKnown RBP4.28□□□□□ -1.72
SNHG1-217ENST00000541578 MAGEE1Q9HCI5 957 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 ZNF304Q9HCX3 659 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 SETD4Q9NVD3 440 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 ABI3Q9P2A4 366 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 ERVK-11Q9UQG0 969 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 CCL27Q9Y4X3 112 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 RGPD1P0DJD0 1748 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 BCL9LQ86UU0 1499 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 RALGAPBQ86X10 1494 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 ZFYVE9O95405 1425 aa4.28□□□□□ -1.72
SNHG1-217ENST00000541578 NINLQ9Y2I6 1382 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 GCC2Q8IWJ2 1684 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 A0A0A0MQY5 61 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 CBY3A6NI87 242 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 CD8B2A6NJW9 211 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 OAZ2O95190 189 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 BAG2O95816 211 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 HIST1H2ABP04908 130 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 FYNP06241 537 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 ATP5BP06576 529 aaKnown RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 MMP3P08254 477 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 ETFAP13804 333 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 HIST1H2ADP20671 130 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 SLC16A2P36021 539 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 PRCPP42785 496 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 CSE1LP55060 971 aaKnown RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 BAATQ14032 418 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 CDC37Q16543 378 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 SYTL3Q4VX76 610 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 CXorf66Q5JRM2 361 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 TTC39AQ5SRH9 613 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 CST9LP1Q5W188 147 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 C11orf88Q6PI97 169 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 SEPT14Q6ZU15 432 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 HIST3H2AQ7L7L0 130 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 SERPINA11Q86U17 422 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 CREBRFQ8IUR6 639 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 RNF168Q8IYW5 571 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 SAMD14Q8IZD0 417 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 ARL14EPQ8N8R7 260 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 EXD3Q8N9H8 876 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 SLC44A5Q8NCS7 719 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 KIF18AQ8NI77 898 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 DUSP19Q8WTR2 217 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 DEPDC1BQ8WUY9 529 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 TMCO6Q96DC7 493 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 MSI2Q96DH6 328 aaKnown RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 ZNF333Q96JL9 665 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 FRMD8Q9BZ67 464 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 CDT1Q9H211 546 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 PLEKHA4Q9H4M7 779 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 PDZD7Q9H5P4 517 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 WDR6Q9NNW5 1121 aaKnown RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 CWC15Q9P013 229 aaKnown RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 LSM4Q9Y4Z0 139 aaKnown RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 SNX5Q9Y5X3 404 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 TMEM131LA2VDJ0 1609 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 LAMC1P11047 1609 aa4.27□□□□□ -1.73
SNHG1-217ENST00000541578 COL22A1Q8NFW1 1626 aaPredicted RBP4.27□□□□□ -1.73
SNHG1-217ENST00000541578 C1orf167Q5SNV9 1468 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 TRBV5-3A0A0A0MS03 114 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 IGLV5-39A0A0G2JS06 123 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 TRIM64A6NGJ6 449 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 TRIM64BA6NI03 449 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 HSPB2A8KAH6 182 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 KLRF2D3W0D1 207 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 TLX3O43711 291 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-217ENST00000541578 TGDSO95455 350 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 TUBBP07437 444 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 CTPS1P17812 591 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 ANXA7P20073 488 aaKnown RBP4.26□□□□□ -1.73
SNHG1-217ENST00000541578 ATP6V1E1P36543 226 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 GP5P40197 560 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 CENPAP49450 140 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 CLCN3P51790 818 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 PNLIPRP2P54317 469 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 SLC18A2Q05940 514 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 GRIK3Q13003 919 aa4.26□□□□□ -1.73
SNHG1-217ENST00000541578 NAE1Q13564 534 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms