RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 RAD23BP54727 409 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 ZNF155Q12901 538 aaPredicted RBP3.89□□□□□ -1.79
KNTC1-211ENST00000541427 OLIG2Q13516 323 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 FRG1Q14331 258 aaKnown RBP3.89□□□□□ -1.79
KNTC1-211ENST00000541427 SLC39A14Q15043 492 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 CYP20A1Q6UW02 462 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 C18orf65Q6ZTR6 163 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 DCP1BQ8IZD4 617 aaKnown RBP3.89□□□□□ -1.79
KNTC1-211ENST00000541427 PAF1Q8N7H5 531 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 ETNPPLQ8TBG4 499 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 WFIKKN2Q8TEU8 576 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 MTBPQ96DY7 904 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 WDFY2Q96P53 400 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 IFIH1Q9BYX4 1025 aaKnown RBP3.89□□□□□ -1.79
KNTC1-211ENST00000541427 NDST4Q9H3R1 872 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 PANK3Q9H999 370 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 SMARCAL1Q9NZC9 954 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 ZNF224Q9NZL3 707 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 ZNF69Q9UC07 566 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 AASSQ9UDR5 926 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 PIAS3Q9Y6X2 628 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 ATP7BP35670 1465 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 ATXN2Q99700 1313 aaKnown RBP3.89□□□□□ -1.79
KNTC1-211ENST00000541427 ANKRD36BQ8N2N9 1353 aa3.89□□□□□ -1.79
KNTC1-211ENST00000541427 PTCH1Q13635 1447 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 SMG6Q86US8 1419 aaKnown RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 USP54Q70EL1 1684 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 MON2Q7Z3U7 1717 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 EIF3CLB5ME19 914 aaKnown RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 DDNO94850 711 aaPredicted RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 NKX2-2O95096 273 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 SPARCP09486 303 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 SRCP12931 536 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 DDX5P17844 614 aaKnown RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 TNFAIP3P21580 790 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 F2RL1P55085 397 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 HNRNPH2P55795 449 aaKnown RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 RRP1P56182 461 aaKnown RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 SEC61BP60468 96 aaKnown RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 RPS3AP61247 264 aaKnown RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 ECT2LQ008S8 904 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 ILF3Q12906 894 aaKnown RBP eCLIP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 CCNG2Q16589 344 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 CTF1Q16619 201 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 CDONQ4KMG0 1287 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 GGNBP1Q5YKI7 109 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 ZNF280DQ6N043 979 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 SPSB3Q6PJ21 355 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 TMTC3Q6ZXV5 915 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 SATL1Q86VE3 508 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 ZNF441Q8N8Z8 693 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 UCMAQ8WVF2 138 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 IGSF8Q969P0 613 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 BICD1Q96G01 975 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 IGSF21Q96ID5 467 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 LMLNQ96KR4 655 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 MAP7D2Q96T17 732 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 PDCL3Q9H2J4 239 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 POLR1BQ9H9Y6 1135 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 ZNF556Q9HAH1 456 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 FBRSL1Q9HCM7 1045 aaKnown RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 TXLNGQ9NUQ3 528 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 IRAK4Q9NWZ3 460 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 ORC3Q9UBD5 711 aaPredicted RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 CNOT8Q9UFF9 292 aaKnown RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 SIX4Q9UIU6 781 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 KCNS2Q9ULS6 477 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 ADAM18Q9Y3Q7 739 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 PSAT1Q9Y617 370 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 KCNE2Q9Y6J6 123 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 AKAP12Q02952 1782 aa3.88□□□□□ -1.79
KNTC1-211ENST00000541427 POLR3AO14802 1390 aaPredicted RBP3.88□□□□□ -1.79
KNTC1-211ENST00000541427 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-211ENST00000541427 IQSEC2Q5JU85 1478 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 LRRC7Q96NW7 1537 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 KIF20BQ96Q89 1820 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 A0A1W2PRG0 241 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 ZNF587BE7ETH6 402 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 SLC16A5O15375 505 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 MLYCDO95822 493 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 ERVFC1-1P60608 527 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 CSTF3Q12996 717 aaKnown RBP3.87□□□□□ -1.79
KNTC1-211ENST00000541427 TNFAIP1Q13829 316 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 DPCR1Q3MIW9 517 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 DPPA4Q7L190 304 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 CPLX4Q7Z7G2 160 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 OR14L1PQ8NHC6 308 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 NEK9Q8TD19 979 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 SMARCE1Q969G3 411 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 FAM149B1Q96BN6 582 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 RHBDF1Q96CC6 855 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 GRAMD2BQ96HH9 432 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 ZNF385AQ96PM9 386 aaKnown RBP3.87□□□□□ -1.79
KNTC1-211ENST00000541427 ACOX2Q99424 681 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 SH3GL2Q99962 352 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 SLC28A3Q9HAS3 691 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 SMC4Q9NTJ3 1288 aa3.87□□□□□ -1.79
KNTC1-211ENST00000541427 LIMA1Q9UHB6 759 aaKnown RBP3.87□□□□□ -1.79
KNTC1-211ENST00000541427 TTC7AQ9ULT0 858 aaPredicted RBP3.87□□□□□ -1.79
KNTC1-211ENST00000541427 RNF123Q5XPI4 1314 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms