RNA–Protein interactions for RNA: ENST00000540848.5

LMO3-224, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LMO3, Length 1,574 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-224ENST00000540848 SPO11Q9Y5K1 396 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 OAS3Q9Y6K5 1087 aaKnown RBP10.09□□□□□ -0.79
LMO3-224ENST00000540848 GBF1Q92538 1859 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 A0A088AWK7 358 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 OR51F1A6NGY5 319 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 H3BMM5 538 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 STX16-NPEPL1H3BU86 382 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 SDHDO14521 159 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 STX16O14662 325 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 ATXN7O15265 892 aaPredicted RBP10.09□□□□□ -0.79
LMO3-224ENST00000540848 ZBTB14O43829 449 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 VPS4BO75351 444 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 GJB3O75712 270 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 FGF18O76093 207 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 PGLSO95336 258 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 CD160O95971 181 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 CYBBP04839 570 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 FGF4P08620 206 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 PKMP14618 531 aaKnown RBP10.09□□□□□ -0.79
LMO3-224ENST00000540848 RAG1P15918 1043 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 GABRR2P28476 465 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 EPHA3P29320 983 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 HMGCLP35914 325 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 VHLP40337 213 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 GJA8P48165 433 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 PLK1P53350 603 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 EPHB1P54762 984 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 CACNG1Q06432 222 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 SULT2A1Q06520 285 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 TRAF2Q12933 501 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 SQLEQ14534 574 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 RCN1Q15293 331 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 KHDC1Q4VXA5 237 aaKnown RBP10.09□□□□□ -0.79
LMO3-224ENST00000540848 C1orf146Q5VVC0 180 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 LILRA6Q6PI73 481 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 FIGNL1Q6PIW4 674 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 LINC00114Q6XXX2 140 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 CHSY3Q70JA7 882 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 FIBCD1Q8N539 461 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 ARL14EPQ8N8R7 260 aaPredicted RBP10.09□□□□□ -0.79
LMO3-224ENST00000540848 KYQ8NBH2 561 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 PPFIBP2Q8ND30 876 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 MDGA1Q8NFP4 955 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 FIBINQ8TAL6 211 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 ANKRD49Q8WVL7 239 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 C1QTNF3Q9BXJ4 246 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 EMILIN2Q9BXX0 1053 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 GSTO2Q9H4Y5 243 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 EFCAB1Q9HAE3 211 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 ZNF334Q9HCZ1 680 aaPredicted RBP10.09□□□□□ -0.79
LMO3-224ENST00000540848 SMPD4Q9NXE4 827 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 ZDHHC3Q9NYG2 299 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 UTP6Q9NYH9 597 aaKnown RBP10.09□□□□□ -0.79
LMO3-224ENST00000540848 SCHIP1Q9P0W5 487 aaPredicted RBP10.09□□□□□ -0.79
LMO3-224ENST00000540848 MCM8Q9UJA3 840 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 LZTS1Q9Y250 596 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 LRRC42Q9Y546 428 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 IRAK3Q9Y616 596 aa10.09□□□□□ -0.79
LMO3-224ENST00000540848 A0A1W2PQ67 120 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 UBA6A0AVT1 1052 aaPredicted RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 DCDC2BA2VCK2 349 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 CCL22O00626 93 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 HTRA2O43464 458 aaPredicted RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 SNAP91O60641 907 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 IGSF6O95976 241 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 SLC4A1P02730 911 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 CKMP06732 381 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 PIRTP0C851 137 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 ITGAXP20702 1163 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 MZF1P28698 734 aaPredicted RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 MC4RP32245 332 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 CSKP41240 450 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 PTDSS1P48651 473 aaKnown RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 HTRA4P83105 476 aaPredicted RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 TIAL1Q01085 375 aaKnown RBP eCLIP10.08□□□□□ -0.8
LMO3-224ENST00000540848 CUL3Q13618 768 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 SEMA3AQ14563 771 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 CRY1Q16526 586 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 NXNQ6DKJ4 435 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 TMEM207Q6UWW9 146 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 LDB1Q86U70 411 aaPredicted RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 MYLK4Q86YV6 388 aaPredicted RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 TMC8Q8IU68 726 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 CLYBLQ8N0X4 340 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 PELI3Q8N2H9 469 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 SPATA6LQ8N4H0 392 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 LEMD2Q8NC56 503 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 AGR3Q8TD06 166 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 DDI1Q8WTU0 396 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 WDR60Q8WVS4 1066 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 CLP1Q92989 425 aaKnown RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 WBP2Q969T9 261 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 ISG20Q96AZ6 181 aaKnown RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 ARMC5Q96C12 935 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 SGF29Q96ES7 293 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 MYO19Q96H55 970 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 PDLIM5Q96HC4 596 aaKnown RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 EXOC2Q96KP1 924 aa10.08□□□□□ -0.8
LMO3-224ENST00000540848 LENG8Q96PV6 779 aaPredicted RBP10.08□□□□□ -0.8
LMO3-224ENST00000540848 UCN2Q96RP3 112 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms