RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 NLRC4Q9NPP4 1024 aa11.49□□□□□ -0.57
CLSTN3-209ENST00000539982 LHX9Q9NQ69 397 aa11.49□□□□□ -0.57
CLSTN3-209ENST00000539982 OGFRQ9NZT2 677 aa11.49□□□□□ -0.57
CLSTN3-209ENST00000539982 RCOR3Q9P2K3 495 aaPredicted RBP11.49□□□□□ -0.57
CLSTN3-209ENST00000539982 PCSK1NQ9UHG2 260 aa11.49□□□□□ -0.57
CLSTN3-209ENST00000539982 LNPEPQ9UIQ6 1025 aa11.49□□□□□ -0.57
CLSTN3-209ENST00000539982 CNOT6Q9ULM6 557 aaKnown RBP11.49□□□□□ -0.57
CLSTN3-209ENST00000539982 DOPEY1Q5JWR5 2465 aa11.49□□□□□ -0.57
CLSTN3-209ENST00000539982 FZD6O60353 706 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 UBXN7O94888 489 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 PDHA1P08559 390 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 TYRP1P17643 537 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 AMD1P17707 334 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 XRCC1P18887 633 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 KLK7P49862 253 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 CCL11P51671 97 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 ZNF135P52742 658 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 MAXP61244 160 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 UBE2IP63279 158 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 MRPL49Q13405 166 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 SYCP1Q15431 976 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 UGT8Q16880 541 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 TCP11X2Q5H9J9 407 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 PPP6R3Q5H9R7 873 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 TMEM26Q6ZUK4 368 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 PPP1R3BQ86XI6 285 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 PSTKQ8IV42 348 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 RAVER1Q8IY67 606 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 ARFGAP1Q8N6T3 406 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 TGM7Q96PF1 710 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 SNRNP25Q9BV90 132 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 SLC29A3Q9BZD2 475 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 BRD8Q9H0E9 1235 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 ACTL8Q9H568 366 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 ACSS2Q9NR19 701 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 FAM207AQ9NSI2 230 aaPredicted RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 SEPT11Q9NVA2 429 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 CWC15Q9P013 229 aaKnown RBP11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 PCDHGB7Q9Y5F8 929 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 SLC30A1Q9Y6M5 507 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 HIVEP3Q5T1R4 2406 aa11.48□□□□□ -0.57
CLSTN3-209ENST00000539982 A0A0J9YYE9 177 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 EPHB6O15197 1021 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 MAFKO60675 156 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 LRCH4O75427 683 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 RASSF9O75901 435 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 LDLRP01130 860 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 VIPP01282 170 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 TRBC1P01850 177 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 PSMA2P25787 234 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 EEF1GP26641 437 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 TNFRSF8P28908 595 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 PTPN4P29074 926 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 LEPRP48357 1165 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 CLCNKAP51800 687 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 STC1P52823 247 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 DPYSQ14117 519 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 MARC1Q5VT66 337 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 ACAD10Q6JQN1 1059 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 JMJD6Q6NYC1 403 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 CYB5D1Q6P9G0 228 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 PRSS42Q7Z5A4 293 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 PHYKPLQ8IUZ5 450 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 MCOLN2Q8IZK6 566 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 AOPEPQ8N6M6 819 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 NSMCE1Q8WV22 266 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 KLHL6Q8WZ60 621 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 FCRL4Q96PJ5 515 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 SMIM14Q96QK8 99 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 PEBP4Q96S96 227 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 AGPAT1Q99943 283 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 ING2Q9H160 280 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 SLAMF7Q9NQ25 335 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 SAMSN1Q9NSI8 373 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 ERRFI1Q9UJM3 462 aaPredicted RBP11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 ZNF451Q9Y4E5 1061 aa11.47□□□□□ -0.57
CLSTN3-209ENST00000539982 ARGFXA6NJG6 315 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 GRID2O43424 1007 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 KIF1CO43896 1103 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 PRPSAP2O60256 369 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 NUAK1O60285 661 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 DPM1O60762 260 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 RNF8O76064 485 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 NELFEP18615 380 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 ELAVL4P26378 380 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 SLC19A1P41440 591 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 MMP13P45452 471 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 CDH6P55285 790 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 RPS15P62841 145 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 CHAF1BQ13112 559 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 MAMLD1Q13495 774 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 CHRNA6Q15825 494 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 PRR30Q53SZ7 412 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 CACHD1Q5VU97 1274 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 CPZQ66K79 652 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 SYVN1Q86TM6 617 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 BPHLQ86WA6 291 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 HPS6Q86YV9 775 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 Q8NA96 180 aa11.46□□□□□ -0.57
CLSTN3-209ENST00000539982 ZDHHC12Q96GR4 267 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms