RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	CRTAM	O95727	393 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	LPO	P22079	712 aa	Predicted RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PSMB4	P28070	264 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SPAM1	P38567	509 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ACTR1B	P42025	376 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ACTR1A	P61163	376 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CYP4F3	Q08477	520 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	MSLN	Q13421	630 aa	Predicted RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	RPS6KA1	Q15418	735 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	LDLRAP1	Q5SW96	308 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	AADACL2	Q6P093	401 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	WASH2P	Q6VEQ5	465 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	NYAP1	Q6ZVC0	841 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	GLT6D1	Q7Z4J2	308 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SLC13A5	Q86YT5	568 aa	Predicted RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	NAGS	Q8N159	534 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CCDC74A	Q96AQ1	378 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SH3KBP1	Q96B97	665 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ZNF514	Q96K75	400 aa	Predicted RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ZNF578	Q96N58	590 aa	Predicted RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	GFM1	Q96RP9	751 aa	Known RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TIMM29	Q9BSF4	260 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ZCCHC2	Q9C0B9	1178 aa	Known RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	B3GNT4	Q9C0J1	378 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	LRRN3	Q9H3W5	708 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	POLR1B	Q9H9Y6	1135 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SARS2	Q9NP81	518 aa	Known RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	IL26	Q9NPH9	171 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	WASH6P	Q9NQA3	447 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SPATS2L	Q9NUQ6	558 aa	Known RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	LRIT1	Q9P2V4	623 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PACSIN2	Q9UNF0	486 aa	Predicted RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TMEM98	Q9Y2Y6	226 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	GPSM3	Q9Y4H4	160 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ST14	Q9Y5Y6	855 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	OAS3	Q9Y6K5	1087 aa	Known RBP	12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CHD6	Q8TD26	2715 aa		12.18	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ZNF106	Q9H2Y7	1883 aa	Known RBP	12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	KIR2DS5	A0A0G2JLQ3	304 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828		A0A0G2JNG1	304 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PRR19	A6NJB7	356 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	AGAP14	A8MT82	685 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828		D6RAR5	112 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	KIR2DS3	K7RE56	304 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	AURKA	O14965	403 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	KMO	O15229	486 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	INPP4B	O15327	924 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	GRID2	O43424	1007 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PIRT	P0C851	137 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	MYF5	P13349	255 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	PSMA3	P25788	255 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	AK4	P27144	223 aa	Predicted RBP	12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ACTN2	P35609	894 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	HADHA	P40939	763 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CHRNA4	P43681	627 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	POLD2	P49005	469 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	GPLD1	P80108	840 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	B4GALNT1	Q00973	533 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ZFP36L1	Q07352	338 aa	Known RBP	12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	KIR2DS5	Q14953	304 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	OASL	Q15646	514 aa	Known RBP	12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	DOK6	Q6PKX4	331 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	C4orf22	Q6V702	233 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ARHGEF18	Q6ZSZ5	1173 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SPRED1	Q7Z699	444 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ADGRG6	Q86SQ4	1221 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	LINC00523	Q86TU6	105 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CCNJL	Q8IV13	435 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SFRP1	Q8N474	314 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ARL14	Q8N4G2	192 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	DDHD1	Q8NEL9	900 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CCDC110	Q8TBZ0	833 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	MDM1	Q8TC05	714 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	EPB41L1	Q9H4G0	881 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	LRRC40	Q9H9A6	602 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	UCK1	Q9HA47	277 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	GRPEL1	Q9HAV7	217 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	HOMER3	Q9NSC5	361 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	SIRPG	Q9P1W8	387 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ATXN10	Q9UBB4	475 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ZNHIT2	Q9UHR6	403 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ENTPD2	Q9Y5L3	495 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	AHCTF1	Q8WYP5	2266 aa		12.17	□□□□□ -0.46
CLTCL1-205	ENST00000538828	CCDC187	A0A096LP49	1063 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	GLYATL1P3	A0A0U1RQE8	302 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828		A0A1W2PQM1	296 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828		A6NCN8	305 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828		B4DGG1	531 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828		H7C0S8	307 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	STX7	O15400	261 aa	Known RBP	12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	LIAS	O43766	372 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	USP12	O75317	370 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ECEL1	O95672	775 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	AP2A1	O95782	977 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	AGT	P01019	485 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ATP1A1	P05023	1023 aa	Known RBP	12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	F3	P13726	295 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	ZNF8	P17098	575 aa	Predicted RBP	12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	FDFT1	P37268	417 aa		12.16	□□□□□ -0.46
CLTCL1-205	ENST00000538828	TRA2A	Q13595	282 aa	Known RBP eCLIP	12.16	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms