RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 KIR2DS5A0A0G2JLQ3 304 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 A0A0G2JNG1 304 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 PIPSLA2A3N6 862 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 LILRA5A6NI73 299 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 TTLL8A6PVC2 850 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 KIR2DS3K7RE56 304 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 FZD6O60353 706 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 RASSF9O75901 435 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 NDUFA10O95299 355 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 CLDN7O95471 211 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 IL1R2P27930 398 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 PMS2P54278 862 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 KIR2DS5Q14953 304 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 DPYSL2Q16555 572 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 FHL5Q5TD97 284 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 CAPRIN2Q6IMN6 1127 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 POLNQ7Z5Q5 900 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 PHYKPLQ8IUZ5 450 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 EFCAB3Q8N7B9 438 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 EPB41L1Q9H4G0 881 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 ARFGAP3Q9NP61 516 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 OGFRQ9NZT2 677 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 RCOR3Q9P2K3 495 aaPredicted RBP13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 CNOT6Q9ULM6 557 aaKnown RBP13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 CHKBQ9Y259 395 aa13.84□□□□□ -0.19
SMARCA4-206ENST00000538456 CACNA1DQ01668 2161 aa13.83□□□□□ -0.19
SMARCA4-206ENST00000538456 SHANK1Q9Y566 2161 aa13.83□□□□□ -0.19
SMARCA4-206ENST00000538456 FADS2P1A8MWK0 482 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 CCDC172P0C7W6 258 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 CASP14P31944 242 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 SERPINB6P35237 376 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 LEPRP48357 1165 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 DSC2Q02487 901 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 IHHQ14623 411 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 PLA2G4EQ3MJ16 856 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 ZNF648Q5T619 568 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 NLRP8Q86W28 1048 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 LPCAT1Q8NF37 534 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 ANKRD20A12PQ8NF67 263 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 CPT1CQ8TCG5 803 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 ZNF653Q96CK0 615 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 PLEKHG4BQ96PX9 1271 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 SYT11Q9BT88 431 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 POLR1EQ9GZS1 481 aaKnown RBP13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 KCND3Q9UK17 655 aa13.83□□□□□ -0.2
SMARCA4-206ENST00000538456 C1orf232A0A0U1RR37 186 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 A1L4Q6 167 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 GRID2O43424 1007 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 KIF1CO43896 1103 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 CREG1O75629 220 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 UBXN7O94888 489 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 C9P02748 559 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 CCNYL3P0C7X3 344 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 ATP1A3P13637 1013 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 AMD1P17707 334 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 UBE2IP63279 158 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 DNASE1L3Q13609 305 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 SEPT7Q16181 437 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 HENMT1Q5T8I9 393 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 PPP1R2P3Q6NXS1 205 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 CRTC3Q6UUV7 619 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 IRF2BP2Q7Z5L9 587 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 TRIM48Q8IWZ4 208 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 AVL9Q8NBF6 648 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 GALNT11Q8NCW6 608 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 SSC4DQ8WTU2 575 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 CT55Q8WUE5 264 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 ERGIC2Q96RQ1 377 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 WDR24Q96S15 920 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 TDRD1Q9BXT4 1180 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 TRIM55Q9BYV6 548 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 ZNF768Q9H5H4 540 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 RMI1Q9H9A7 625 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 KLC4Q9NSK0 619 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 SCHIP1Q9P0W5 487 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 ATXN10Q9UBB4 475 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 MYO1AQ9UBC5 1043 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 LIMA1Q9UHB6 759 aaKnown RBP13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 DNPEPQ9ULA0 475 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 SLC30A1Q9Y6M5 507 aa13.82□□□□□ -0.2
SMARCA4-206ENST00000538456 HIVEP3Q5T1R4 2406 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 OR5K4A6NMS3 321 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 SEMA7AO75326 666 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 VIPP01282 170 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 FTLP02792 175 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 RNF224P0DH78 156 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 RARAP10276 462 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 ZNF8P17098 575 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 PCK1P35558 622 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 GARSP41250 739 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 SPINT3P49223 89 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 CHAF1BQ13112 559 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 IL11RAQ14626 422 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 TDRD12Q587J7 1177 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 TXNRD3NBQ6F5E7 133 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 FAM92BQ6ZTR7 304 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 TMEM26Q6ZUK4 368 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 TEX26Q8N6G2 289 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 RSC1A1Q92681 617 aa13.81□□□□□ -0.2
SMARCA4-206ENST00000538456 OR2AG1Q9H205 316 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms