RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 SPRED1Q7Z699 444 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 LSMEM2Q8N112 164 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 SNIP1Q8TAD8 396 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 SLC35B2Q8TB61 432 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 FAM118BQ9BPY3 351 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 FSD1LQ9BXM9 530 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 LRRN3Q9H3W5 708 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 SUDS3Q9H7L9 328 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 POLR1BQ9H9Y6 1135 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 ATXN10Q9UBB4 475 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 GUCA1BQ9UMX6 200 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 RAXQ9Y2V3 346 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 AK5Q9Y6K8 562 aa17.03■□□□□ 0.32
SFSWAP-205ENST00000537164 A0A1W2PNU3 283 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 F5H423 210 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 BRINP1O60477 761 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 ECEL1O95672 775 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 AGTP01019 485 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 PSMB4P28070 264 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 GPR3P46089 330 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 CLCNKAP51800 687 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 B4GALNT1Q00973 533 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 MSLNQ13421 630 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 ALS2CLQ60I27 953 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 ADGRG6Q86SQ4 1221 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 PHYKPLQ8IUZ5 450 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 CCNJLQ8IV13 435 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 ARL14Q8N4G2 192 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 SLC25A41Q8N5S1 370 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 CCDC110Q8TBZ0 833 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 LIN37Q96GY3 246 aaPredicted RBP17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 GFM1Q96RP9 751 aaKnown RBP17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 C19orf43Q9BQ61 176 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 ARNT2Q9HBZ2 717 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 IL26Q9NPH9 171 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 ZNHIT2Q9UHR6 403 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 TMPRSS11EQ9UL52 423 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 PCDHGA8Q9Y5G5 932 aa17.02■□□□□ 0.32
SFSWAP-205ENST00000537164 ADAMTS20P59510 1910 aa17.02■□□□□ 0.31
SFSWAP-205ENST00000537164 TCRBV7S2A1N4TA0A589 114 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 A6NCN8 305 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 TMX2-CTNND1H3BSU7 103 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 TLX3O43711 291 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 VEGFDO43915 354 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 RPLP0P05388 317 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 CCDC175P0C221 793 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 ZNF8P17098 575 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 CCKBRP32239 447 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 FASLGP48023 281 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 MAZP56270 477 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 CCZ1BP86790 482 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 CCZ1P86791 482 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 PRPSAP1Q14558 356 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 CLPPQ16740 277 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 TBC1D25Q3MII6 688 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 ATP13A5Q4VNC0 1218 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 MEI1Q5TIA1 1274 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 CHST15Q7LFX5 561 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 GLT6D1Q7Z4J2 308 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 SFRP1Q8N474 314 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 PATE1Q8WXA2 126 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 RTP4Q96DX8 246 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 ATXN7L3BQ96GX2 97 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 ZNF578Q96N58 590 aaPredicted RBP17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 BPIFA1Q9NP55 256 aa17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 R3HDM2Q9Y2K5 976 aaKnown RBP17.01■□□□□ 0.31
SFSWAP-205ENST00000537164 PRR19A6NJB7 356 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 LOC400499M0QZD8 3231 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 GAPDHSO14556 408 aaPredicted RBP17■□□□□ 0.31
SFSWAP-205ENST00000537164 GRID2O43424 1007 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 B4GAT1O43505 415 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 SLC4A1P02730 911 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 MPOP05164 745 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 PTMAP06454 111 aaKnown RBP17■□□□□ 0.31
SFSWAP-205ENST00000537164 ACTN2P35609 894 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 SPAM1P38567 509 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 EIF2S3P41091 472 aaKnown RBP17■□□□□ 0.31
SFSWAP-205ENST00000537164 MLLT3P42568 568 aaPredicted RBP17■□□□□ 0.31
SFSWAP-205ENST00000537164 ERVPABLB-1P60509 514 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 GABREP78334 506 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 ZFP36L1Q07352 338 aaKnown RBP17■□□□□ 0.31
SFSWAP-205ENST00000537164 SQSTM1Q13501 440 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 PARP6Q2NL67 630 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 KCTD11Q693B1 232 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 DENND5AQ6IQ26 1287 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 IGSF10Q6WRI0 2623 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 BLOC1S5Q8TDH9 187 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 FGF11Q92914 225 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 PRR11Q96HE9 360 aaPredicted RBP17■□□□□ 0.31
SFSWAP-205ENST00000537164 FICDQ9BVA6 458 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 FRMD8P1Q9BZ68 369 aaPredicted RBP17■□□□□ 0.31
SFSWAP-205ENST00000537164 OR2AG1Q9H205 316 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 ASCL3Q9NQ33 180 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 FEZ2Q9UHY8 353 aaPredicted RBP17■□□□□ 0.31
SFSWAP-205ENST00000537164 PRKAB1Q9Y478 270 aa17■□□□□ 0.31
SFSWAP-205ENST00000537164 CCDC187A0A096LP49 1063 aa16.99■□□□□ 0.31
SFSWAP-205ENST00000537164 PPM1DO15297 605 aa16.99■□□□□ 0.31
SFSWAP-205ENST00000537164 ZW10O43264 779 aa16.99■□□□□ 0.31
SFSWAP-205ENST00000537164 EML2O95834 649 aa16.99■□□□□ 0.31
SFSWAP-205ENST00000537164 EIF3IQ13347 325 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms