RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 SOX30O94993 753 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 NDST3O95803 873 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 ALDOAP04075 364 aaKnown RBP4.03□□□□□ -1.76
SOX6-217ENST00000533870 S100A9P06702 114 aaKnown RBP4.03□□□□□ -1.76
SOX6-217ENST00000533870 CKMT2P17540 419 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 GMPSP49915 693 aaPredicted RBP4.03□□□□□ -1.76
SOX6-217ENST00000533870 CAPZA1P52907 286 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 CDH4P55283 916 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 AP3S2P59780 193 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 MRPS10P82664 201 aaKnown RBP4.03□□□□□ -1.76
SOX6-217ENST00000533870 IL1RL1Q01638 556 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 CREMQ03060 361 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 GRM3Q14832 879 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 ARHGEF6Q15052 776 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 TAF5Q15542 800 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 ANKDD1AQ495B1 522 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 PNCKQ6P2M8 343 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 ANKS3Q6ZW76 656 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 ZNF367Q7RTV3 350 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 RBFAQ8N0V3 343 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 RYBPQ8N488 228 aaPredicted RBP4.03□□□□□ -1.76
SOX6-217ENST00000533870 OR52K1Q8NGK4 314 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 CAPSLQ8WWF8 208 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 C8orf48Q96LL4 319 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 TMEM209Q96SK2 561 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 ZCCHC2Q9C0B9 1178 aaKnown RBP4.03□□□□□ -1.76
SOX6-217ENST00000533870 SLA2Q9H6Q3 261 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 WDCPQ9H6R7 721 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 DDX4Q9NQI0 724 aaKnown RBP4.03□□□□□ -1.76
SOX6-217ENST00000533870 ABCC13Q9NSE7 274 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 ASIC5Q9NY37 505 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 CNOT6Q9ULM6 557 aaKnown RBP4.03□□□□□ -1.76
SOX6-217ENST00000533870 KCNH4Q9UQ05 1017 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 BTRCQ9Y297 605 aa4.03□□□□□ -1.76
SOX6-217ENST00000533870 ZBTB24O43167 697 aaPredicted RBP4.03□□□□□ -1.77
SOX6-217ENST00000533870 CPNE6O95741 557 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 CST1P01037 141 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 CYP11A1P05108 521 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 ODC1P11926 461 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 ALOX12P18054 663 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 ITGB6P18564 788 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 MYL12AP19105 171 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 IGFBP5P24593 272 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 PTGER3P43115 390 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 NDST2P52849 883 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 HERVK_113P63132 956 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 GBE1Q04446 702 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 LAMTOR4Q0VGL1 99 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 VEZF1Q14119 521 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 GAS6Q14393 721 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 CLPPQ16740 277 aaPredicted RBP4.03□□□□□ -1.77
SOX6-217ENST00000533870 OTUD3Q5T2D3 398 aaPredicted RBP4.03□□□□□ -1.77
SOX6-217ENST00000533870 LCN1P1Q5VSP4 162 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 REP15Q6BDI9 236 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 ELMSAN1Q6PJG2 1045 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 PAOXQ6QHF9 649 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 CDHR3Q6ZTQ4 885 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 KBTBD2Q8IY47 623 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 CDYL2Q8N8U2 506 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 FNDC5Q8NAU1 212 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 OR8J1Q8NGP2 316 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 OR10T2Q8NGX3 314 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 NRG4Q8WWG1 115 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 RPL3LQ92901 407 aaKnown RBP4.03□□□□□ -1.77
SOX6-217ENST00000533870 HPS1Q92902 700 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 CXorf40BQ96DE9 158 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 HYLS1Q96M11 299 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 NPY6RQ99463 290 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 DOK1Q99704 481 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 ERVK-6Q9BXR3 956 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 DUSP16Q9BY84 665 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 DCSTAMPQ9H295 470 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 DSN1Q9H410 356 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 FOLH1BQ9HBA9 442 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 GPATCH2LQ9NWQ4 482 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 FAM120CQ9NX05 1096 aaKnown RBP4.03□□□□□ -1.77
SOX6-217ENST00000533870 NOD1Q9Y239 953 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 PKP3Q9Y446 797 aa4.03□□□□□ -1.77
SOX6-217ENST00000533870 LMO7Q8WWI1 1683 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 LCHNA4D1U4 455 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 F8W810 466 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 PRAF2O60831 178 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 RAMP2O60895 175 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 BCAS1O75363 584 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 SLC11A2P49281 568 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 AP1S1P61966 158 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 UBE3AQ05086 875 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 KEAP1Q14145 624 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 PARP15Q460N3 678 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CCNJQ5T5M9 372 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 PTRHD1Q6GMV3 140 aaKnown RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 FAM117BQ6P1L5 589 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 ARHGAP36Q6ZRI8 547 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 EEPD1Q7L9B9 569 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CMC1Q7Z7K0 106 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 TSPYL5Q86VY4 417 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 CHPFQ8IZ52 775 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CYP2W1Q8TAV3 490 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 ACER1Q8TDN7 264 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 LRTOMTQ8WZ04 291 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms