RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 CCNA2P20248 432 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 PDIA3P30101 505 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 HOXA11P31270 313 aaPredicted RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 CNR2P34972 360 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 BMI1P35226 326 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 SYKP43405 635 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 MAPK9P45984 424 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 NPTX2P47972 431 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 MTNR1BP49286 362 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 RAB13P51153 203 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 ALDH3A2P51648 485 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 ARHGDIAP52565 204 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 ARFIP1P53367 373 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 SLC26A5P58743 744 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 ABATP80404 500 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 CEBPZQ03701 1054 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 CD69Q07108 199 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 MGAT5Q09328 741 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 IFIT5Q13325 482 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 PMS2P3Q13401 168 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 KCNC3Q14003 757 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 SPARCL1Q14515 664 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 ODF1Q14990 250 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 MFSD13AQ14CX5 517 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 PTPN21Q16825 1174 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 TRMT5Q32P41 509 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 ZNF568Q3ZCX4 644 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 RINT1Q6NUQ1 792 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 TTC27Q6P3X3 843 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 BLOC1S2Q6QNY1 142 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 UGT2A3Q6UWM9 527 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 ARSKQ6UWY0 536 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 RGS9BPQ6ZS82 235 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 MIGA2Q7L4E1 593 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 COL23A1Q86Y22 540 aaPredicted RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 PDSS2Q86YH6 399 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 HIPK1Q86Z02 1210 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 FAM217AQ8IXS0 508 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 KIAA2013Q8IYS2 634 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 ENTHD1Q8IYW4 607 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 SLC35F6Q8N357 371 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 SLC25A41Q8N5S1 370 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 AOPEPQ8N6M6 819 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 UBL4BQ8N7F7 174 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 FAM71DQ8N9W8 422 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 OR14C36Q8NHC7 312 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 AGR3Q8TD06 166 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 BLOC1S5Q8TDH9 187 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 RNF139Q8WU17 664 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 HEXDCQ8WVB3 486 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 S100ZQ8WXG8 99 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 CFHR4Q92496 578 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 UFD1Q92890 307 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 STMN2Q93045 179 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 CPNE4Q96A23 557 aaPredicted RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 TAMM41Q96BW9 452 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 LRRC39Q96DD0 335 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 OMA1Q96E52 524 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 FUBP3Q96I24 572 aaKnown RBP eCLIP5.49□□□□□ -1.53
CD44-236ENST00000533222 MAGED4Q96JG8 741 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 CCDC17Q96LX7 622 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 QRFPRQ96P65 431 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 BCL7BQ9BQE9 202 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 PELOQ9BRX2 385 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 FSD1Q9BTV5 496 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 SLC26A6Q9BXS9 759 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 TRIM2Q9C040 744 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 WDR12Q9GZL7 423 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 WNT8AQ9H1J5 351 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 C2orf40Q9H1Z8 148 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 GAREM1Q9H706 876 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 NMUR1Q9HB89 426 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 C1orf112Q9NSG2 853 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 BLOC1S4Q9NUP1 217 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 UFSP2Q9NUQ7 469 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 VPS54Q9P1Q0 977 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 CEP72Q9P209 647 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 COPG2Q9UBF2 871 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 EIF3KQ9UBQ5 218 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 CYTH4Q9UIA0 394 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 CNOT7Q9UIV1 285 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 TRMT6Q9UJA5 497 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 AGO1Q9UL18 857 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 PCDHA7Q9UN72 937 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 ZFR2Q9UPR6 939 aaKnown RBP5.49□□□□□ -1.53
CD44-236ENST00000533222 UGT2A1Q9Y4X1 527 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 AP4S1Q9Y587 144 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 NFS1Q9Y697 457 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 MAU2Q9Y6X3 613 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 CEP170Q5SW79 1584 aa5.49□□□□□ -1.53
CD44-236ENST00000533222 ZC3H13Q5T200 1668 aaKnown RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 ADGRB2O60241 1585 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ERVK-7P63135 1459 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 ARHGEF10O15013 1369 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 A0A0G2JLL6 359 aaPredicted RBP5.48□□□□□ -1.53
CD44-236ENST00000533222 A0A1W2PRG6 482 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 PIPSLA2A3N6 862 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 RGSL1A5PLK6 1076 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 H3BUI4 141 aa5.48□□□□□ -1.53
CD44-236ENST00000533222 K7ERQ8 282 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms