RNA–Protein interactions for RNA: ENST00000533096.5

COPB1-209, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-209ENST00000533096 LRCH4O75427 683 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 TRBC1P01850 177 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 SLC2A4P14672 509 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 TCF4P15884 667 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 IL1R2P27930 398 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
COPB1-209ENST00000533096 STC1P52823 247 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 EPHA4P54764 986 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 CDH6P55285 790 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 CHAF1BQ13112 559 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 DNASE1L3Q13609 305 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 MAP7Q14244 749 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 KIR2DS5Q14953 304 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 PLA2G4EQ3MJ16 856 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 CRTC2Q53ET0 693 aaPredicted RBP12.87□□□□□ -0.35
COPB1-209ENST00000533096 BOLA3Q53S33 107 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 TDRD12Q587J7 1177 aaKnown RBP12.87□□□□□ -0.35
COPB1-209ENST00000533096 CACHD1Q5VU97 1274 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 CDKAL1Q5VV42 579 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 CYP4V2Q6ZWL3 525 aaPredicted RBP12.87□□□□□ -0.35
COPB1-209ENST00000533096 IRF2BP2Q7Z5L9 587 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 POLNQ7Z5Q5 900 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 PHYKPLQ8IUZ5 450 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 TTC30BQ8N4P2 665 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 LPCAT1Q8NF37 534 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 ANKRD20A12PQ8NF67 263 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 CSPG4P5Q96PW8 444 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 RUFY1Q96T51 708 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 MFRPQ9BY79 579 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 OR2AG1Q9H205 316 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 AKIRIN1Q9H9L7 192 aaPredicted RBP12.87□□□□□ -0.35
COPB1-209ENST00000533096 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.87□□□□□ -0.35
COPB1-209ENST00000533096 RBM22Q9NW64 420 aaKnown RBP eCLIP12.87□□□□□ -0.35
COPB1-209ENST00000533096 OGFRQ9NZT2 677 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 LUZP4Q9P127 313 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 ATXN10Q9UBB4 475 aa12.87□□□□□ -0.35
COPB1-209ENST00000533096 TLN1Q9Y490 2541 aaKnown RBP12.87□□□□□ -0.35
COPB1-209ENST00000533096 C1orf232A0A0U1RR37 186 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 A6NCN8 305 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 PDZK1P1A8MUH7 402 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 FADS2P1A8MWK0 482 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 SLC25A14O95258 325 aaPredicted RBP12.86□□□□□ -0.35
COPB1-209ENST00000533096 RARAP10276 462 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 ZNF30P17039 623 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 ZNF8P17098 575 aaPredicted RBP12.86□□□□□ -0.35
COPB1-209ENST00000533096 SLC19A1P41440 591 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 ZNF135P52742 658 aaPredicted RBP12.86□□□□□ -0.35
COPB1-209ENST00000533096 PMS2P54278 862 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 IHHQ14623 411 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 IL11RAQ14626 422 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 RALGPS1Q5JS13 557 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 CCDC122Q5T0U0 273 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 ALS2CLQ60I27 953 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 IRGCQ6NXR0 463 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 CRTC3Q6UUV7 619 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 TMEM26Q6ZUK4 368 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 ZNF765Q7L2R6 523 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 PSTKQ8IV42 348 aaKnown RBP12.86□□□□□ -0.35
COPB1-209ENST00000533096 GALNT11Q8NCW6 608 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 PRR7Q8TB68 274 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 CT55Q8WUE5 264 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 WDR24Q96S15 920 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 SLC25A23Q9BV35 468 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 POLR1EQ9GZS1 481 aaKnown RBP12.86□□□□□ -0.35
COPB1-209ENST00000533096 EPB41L1Q9H4G0 881 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 SIDT1Q9NXL6 827 aaKnown RBP12.86□□□□□ -0.35
COPB1-209ENST00000533096 VPS18Q9P253 973 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 ZNF624Q9P2J8 865 aaPredicted RBP12.86□□□□□ -0.35
COPB1-209ENST00000533096 RCOR3Q9P2K3 495 aaPredicted RBP12.86□□□□□ -0.35
COPB1-209ENST00000533096 SLC23A2Q9UGH3 650 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 SCN8AQ9UQD0 1980 aa12.86□□□□□ -0.35
COPB1-209ENST00000533096 PTPN13Q12923 2485 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 ARGFXA6NJG6 315 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 ENO4A6NNW6 628 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 LGALS16A8MUM7 142 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 NUAK1O60285 661 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 FZD6O60353 706 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 RNF224P0DH78 156 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 XRCC1P18887 633 aaPredicted RBP12.85□□□□□ -0.35
COPB1-209ENST00000533096 RPL10P27635 214 aaKnown RBP12.85□□□□□ -0.35
COPB1-209ENST00000533096 SPINT3P49223 89 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 PGDP52209 483 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 RPS18P62269 152 aaKnown RBP12.85□□□□□ -0.35
COPB1-209ENST00000533096 MMRN1Q13201 1228 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 SEMA5AQ13591 1074 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 KRT81Q14533 505 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 INSCQ1MX18 579 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 ANKRD20A8PQ5CZ79 823 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 CT47A1Q5JQC4 288 aaPredicted RBP12.85□□□□□ -0.35
COPB1-209ENST00000533096 FAM182AQ5T1J6 154 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 ZNF787Q6DD87 383 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 TXNRD3NBQ6F5E7 133 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 CCHCR1Q8TD31 782 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 SPATA16Q9BXB7 569 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 ACTL8Q9H568 366 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 RMI1Q9H9A7 625 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 PCDH9Q9HC56 1237 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 LHX9Q9NQ69 397 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 DTLQ9NZJ0 730 aa12.85□□□□□ -0.35
COPB1-209ENST00000533096 A6NL46 340 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms