RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 WDR48Q8TAF3 677 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 NXPE2Q96DL1 559 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 TBL1YQ9BQ87 522 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 TRIM39Q9HCM9 518 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 ATXN10Q9UBB4 475 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 PKP3Q9Y446 797 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 PRKAB1Q9Y478 270 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 PCDHB1Q9Y5F3 818 aa15.22■□□□□ 0.03
CPSF1-210ENST00000532935 BUD23O43709 281 aaKnown RBP15.21■□□□□ 0.03
CPSF1-210ENST00000532935 LIASO43766 372 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 NUAK1O60285 661 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 USP12O75317 370 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 TCEA3O75764 348 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 METTL18O95568 372 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 ZNF8P17098 575 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-210ENST00000532935 SPAM1P38567 509 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 MAZP56270 477 aaKnown RBP15.21■□□□□ 0.03
CPSF1-210ENST00000532935 CYP4F3Q08477 520 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 OASLQ15646 514 aaKnown RBP15.21■□□□□ 0.03
CPSF1-210ENST00000532935 P3H1Q32P28 736 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 ATP13A5Q4VNC0 1218 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 RBM44Q6ZP01 1051 aaKnown RBP15.21■□□□□ 0.03
CPSF1-210ENST00000532935 CHST15Q7LFX5 561 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-210ENST00000532935 ADGRG6Q86SQ4 1221 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 C17orf82Q86X59 251 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-210ENST00000532935 C1orf54Q8WWF1 131 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 LRRC45Q96CN5 670 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 RTP4Q96DX8 246 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 VPS35Q96QK1 796 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 TLR10Q9BXR5 811 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 NRSN2Q9GZP1 204 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 OR2AG1Q9H205 316 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 SYNDIG1Q9H7V2 258 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 IL26Q9NPH9 171 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.21■□□□□ 0.03
CPSF1-210ENST00000532935 LRIT1Q9P2V4 623 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 DKK4Q9UBT3 224 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 APPL1Q9UKG1 709 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 TMPRSS11EQ9UL52 423 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 ARL5AQ9Y689 179 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 RNF215Q9Y6U7 377 aa15.21■□□□□ 0.03
CPSF1-210ENST00000532935 C2orf81A6NN90 581 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 GPR89AB7ZAQ6 455 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 TAF4O00268 1085 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 NTN3O00634 580 aaPredicted RBP15.2■□□□□ 0.02
CPSF1-210ENST00000532935 STX7O15400 261 aaKnown RBP15.2■□□□□ 0.02
CPSF1-210ENST00000532935 GRID2O43424 1007 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 NUDT21O43809 227 aaKnown RBP15.2■□□□□ 0.02
CPSF1-210ENST00000532935 PPFIA2O75334 1257 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 ECEL1O95672 775 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 GPR89BP0CG08 455 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 PNLIPP16233 465 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 STIP1P31948 543 aaKnown RBP15.2■□□□□ 0.02
CPSF1-210ENST00000532935 CCL7P80098 99 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 SPIDRQ14159 915 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 SPARCL1Q14515 664 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 RTP5Q14D33 572 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 TAF1AQ15573 450 aaPredicted RBP15.2■□□□□ 0.02
CPSF1-210ENST00000532935 CHRNA6Q15825 494 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 KCTD11Q693B1 232 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 DENND5AQ6IQ26 1287 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 FAM151BQ6UXP7 276 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 PROSER1Q86XN7 944 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 CCNJLQ8IV13 435 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 NAGSQ8N159 534 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 DTX3LQ8TDB6 740 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 BRSK1Q8TDC3 778 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 PATE1Q8WXA2 126 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 ARNT2Q9HBZ2 717 aa15.2■□□□□ 0.02
CPSF1-210ENST00000532935 FEZ2Q9UHY8 353 aaPredicted RBP15.2■□□□□ 0.02
CPSF1-210ENST00000532935 GLYATL1P3A0A0U1RQE8 302 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 CHUKO15111 745 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 VEGFDO43915 354 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 MTX2O75431 263 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 RPLP0P05388 317 aaKnown RBP15.19■□□□□ 0.02
CPSF1-210ENST00000532935 ACP5P13686 325 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 LPOP22079 712 aaPredicted RBP15.19■□□□□ 0.02
CPSF1-210ENST00000532935 MSLNQ13421 630 aaPredicted RBP15.19■□□□□ 0.02
CPSF1-210ENST00000532935 SNX1Q13596 522 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 PTPRCAPQ14761 206 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 SIX1Q15475 284 aaPredicted RBP15.19■□□□□ 0.02
CPSF1-210ENST00000532935 ISXQ2M1V0 245 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 KHDC1Q4VXA5 237 aaKnown RBP15.19■□□□□ 0.02
CPSF1-210ENST00000532935 ARL14Q8N4G2 192 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 TAB3Q8N5C8 712 aaPredicted RBP15.19■□□□□ 0.02
CPSF1-210ENST00000532935 Q8N9G6 341 aaPredicted RBP15.19■□□□□ 0.02
CPSF1-210ENST00000532935 LRRN3Q9H3W5 708 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 LRRC40Q9H9A6 602 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 ZNF148Q9UQR1 794 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 KCNK6Q9Y257 313 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 AK5Q9Y6K8 562 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 PKD1L2Q7Z442 2459 aa15.19■□□□□ 0.02
CPSF1-210ENST00000532935 A0A1W2PQM1 296 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 SRRM3A6NNA2 597 aaPredicted RBP15.18■□□□□ 0.02
CPSF1-210ENST00000532935 RHPN2P1A8MT19 583 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 GAPDHSO14556 408 aaPredicted RBP15.18■□□□□ 0.02
CPSF1-210ENST00000532935 PSMD3O43242 534 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 UGT1A9O60656 530 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 CRTAMO95727 393 aa15.18■□□□□ 0.02
CPSF1-210ENST00000532935 UGT1A6P19224 532 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms