RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 F8VZ95 297 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 RHODO00212 210 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 HSPB6O14558 160 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 PRPF4O43172 522 aaKnown RBP eCLIP3.31□□□□□ -1.88
CD44-229ENST00000528672 KLK8O60259 260 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 SYNCRIPO60506 623 aaKnown RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 GOSR1O95249 250 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 TOP3BO95985 862 aaKnown RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 BCL10O95999 233 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 MMP2P08253 660 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 CDK4P11802 303 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 UNGP13051 313 aaPredicted RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 GJA1P17302 382 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 LMO1P25800 156 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ACADLP28330 430 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 HOXC8P31273 242 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 TCF7P36402 384 aaPredicted RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 PRPHP41219 470 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 CXCR3P49682 368 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 RAB28P51157 221 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ARSEP51690 589 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 POLGP54098 1239 aaPredicted RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 MRPS34P82930 218 aaKnown RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 ECT2LQ008S8 904 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ZNF91Q05481 1191 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 CXCL9Q07325 125 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 GRSF1Q12849 480 aaKnown RBP eCLIP3.31□□□□□ -1.88
CD44-229ENST00000528672 RALGDSQ12967 914 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 LAMB3Q13751 1172 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 PKP1Q13835 747 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 CAPSQ13938 189 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ZNF268Q14587 947 aaPredicted RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 SNAPC1Q16533 368 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ZSCAN26Q16670 478 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 HYAL4Q2M3T9 481 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 SOWAHAQ2M3V2 549 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 RABL6Q3YEC7 729 aaPredicted RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 MMEL1Q495T6 779 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 TTC31Q49AM3 519 aaPredicted RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 ESCO2Q56NI9 601 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ENTPD8Q5MY95 495 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 TTC39AQ5SRH9 613 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 PAPD7Q5XG87 772 aaKnown RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 TMEM198Q66K66 360 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ISM2Q6H9L7 571 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 IYDQ6PHW0 289 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 SUSD1Q6UWL2 747 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 LINGO2Q7L985 606 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ADCK2Q7Z695 626 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 IQCHQ86VS3 1027 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 DENND6AQ8IWF6 608 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 SLC35F3Q8IY50 421 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 CCAR2Q8N163 923 aaKnown RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 PARP16Q8N5Y8 322 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 PI4KAP1Q8N8J0 262 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 TRIML1Q8N9V2 468 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 XXYLT1Q8NBI6 393 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 BEST2Q8NFU1 509 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 OR8H1Q8NGG4 311 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 LILRB1Q8NHL6 650 aaPredicted RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 ZNF398Q8TD17 642 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 BCAS4Q8TDM0 211 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ANKRD49Q8WVL7 239 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 TEKT4Q8WW24 435 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 SNAPC3Q92966 411 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 IGSF8Q969P0 613 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 MSI2Q96DH6 328 aaKnown RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 VCPIP1Q96JH7 1222 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 CLMNQ96JQ2 1002 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 SLC41A2Q96JW4 573 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 FAM81BQ96LP2 452 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 RMDN2Q96LZ7 410 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 CCDC114Q96M63 670 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 CCDC43Q96MW1 224 aaKnown RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 SLC39A3Q9BRY0 314 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 SLC25A23Q9BV35 468 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 NUP85Q9BW27 656 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 FAM129AQ9BZQ8 928 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 RTN4RQ9BZR6 473 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 DNAI2Q9GZS0 605 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 MVB12BQ9H7P6 319 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 MBNL1Q9NR56 388 aaKnown RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 HAO2Q9NYQ3 351 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 CRNNQ9UBG3 495 aaPredicted RBP3.31□□□□□ -1.88
CD44-229ENST00000528672 ZNF148Q9UQR1 794 aa3.31□□□□□ -1.88
CD44-229ENST00000528672 ARHGEF40Q8TER5 1519 aa3.3□□□□□ -1.88
CD44-229ENST00000528672 TMEM94Q12767 1356 aa3.3□□□□□ -1.88
CD44-229ENST00000528672 A0A0G2JK05 382 aa3.3□□□□□ -1.88
CD44-229ENST00000528672 EDDM13A0A1B0GTR0 161 aa3.3□□□□□ -1.88
CD44-229ENST00000528672 LINC00854A0A1B0GVQ3 168 aa3.3□□□□□ -1.88
CD44-229ENST00000528672 C2orf81A6NN90 581 aa3.3□□□□□ -1.88
CD44-229ENST00000528672 TMCO5BA8MYB1 307 aa3.3□□□□□ -1.88
CD44-229ENST00000528672 H0YAE9 185 aa3.3□□□□□ -1.88
CD44-229ENST00000528672 ATP2A1O14983 1001 aa3.3□□□□□ -1.88
CD44-229ENST00000528672 PLRG1O43660 514 aaKnown RBP3.3□□□□□ -1.88
CD44-229ENST00000528672 MTRF1O75570 445 aaKnown RBP3.3□□□□□ -1.88
CD44-229ENST00000528672 RSL1D1O76021 490 aaKnown RBP3.3□□□□□ -1.88
CD44-229ENST00000528672 TRUB2O95900 331 aaKnown RBP3.3□□□□□ -1.88
CD44-229ENST00000528672 HSPA5P11021 654 aaKnown RBP3.3□□□□□ -1.88
CD44-229ENST00000528672 CHRNB1P11230 501 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms