RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TIE1P35590 1138 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 RPL38P63173 70 aaKnown RBP14.98□□□□□ -0.01
USP47-207ENST00000527733 MGAT3Q09327 533 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 XKR4Q5GH76 650 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 TPRG1Q6ZUI0 275 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 TMEM132CQ8N3T6 1108 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 PIF1Q9H611 641 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 ATAD3AQ9NVI7 634 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 PSME2Q9UL46 239 aa14.98□□□□□ -0.01
USP47-207ENST00000527733 TM7SF2O76062 418 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 MPSTP25325 297 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 GPX6P59796 221 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 PRKG2Q13237 762 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 INO80DQ53TQ3 878 aaPredicted RBP14.97□□□□□ -0.01
USP47-207ENST00000527733 CYP20A1Q6UW02 462 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 ZNF598Q86UK7 904 aaKnown RBP14.97□□□□□ -0.01
USP47-207ENST00000527733 C17orf64Q86WR6 236 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 VPS33AQ96AX1 596 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 ZNF514Q96K75 400 aaPredicted RBP14.97□□□□□ -0.01
USP47-207ENST00000527733 SNX13Q9Y5W8 968 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 RGSL1A5PLK6 1076 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 UGT1A6P19224 532 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 UGT1A1P22309 533 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 UGT1A4P22310 534 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 UGT1A3P35503 534 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 UGT1A5P35504 534 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 RFX3P48380 749 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 PDE1CQ14123 709 aaPredicted RBP14.97□□□□□ -0.01
USP47-207ENST00000527733 ARL13AQ5H913 290 aaPredicted RBP14.97□□□□□ -0.01
USP47-207ENST00000527733 FOXR1Q6PIV2 292 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 ZNF621Q6ZSS3 439 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 RNF148Q8N7C7 305 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 MARK4Q96L34 752 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 GATA5Q9BWX5 397 aaPredicted RBP14.97□□□□□ -0.01
USP47-207ENST00000527733 TGDSO95455 350 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 ATP6V1E1P36543 226 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 OLIG2Q13516 323 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 ZNF460Q14592 562 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 ITPRIPL2Q3MIP1 535 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 PLA2G4EQ3MJ16 856 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 PAGE2Q7Z2X7 111 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 SCML4Q8N228 414 aa14.97□□□□□ -0.01
USP47-207ENST00000527733 CXorf49A8MYA2 514 aaPredicted RBP14.96□□□□□ -0.01
USP47-207ENST00000527733 UNC5CO95185 931 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 ZNF682O95780 498 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 LINC00032P0C843 101 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 YTHDF3Q7Z739 585 aaKnown RBP14.96□□□□□ -0.01
USP47-207ENST00000527733 DCAKDQ8WVC6 231 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 KIFC1Q9BW19 673 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 SEC24DO94855 1032 aaPredicted RBP14.96□□□□□ -0.01
USP47-207ENST00000527733 ITPKAP23677 461 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 UBXN2BQ14CS0 331 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 TSNQ15631 228 aaKnown RBP14.96□□□□□ -0.01
USP47-207ENST00000527733 AP3M1Q9Y2T2 418 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 UPK3BL1B0FP48 263 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 UPK3BL2E5RIL1 263 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 ZNF30P17039 623 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 MAT2AP31153 395 aaKnown RBP14.96□□□□□ -0.01
USP47-207ENST00000527733 TAS1R1Q7RTX1 841 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 DHFR2Q86XF0 187 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 SIDT2Q8NBJ9 832 aaKnown RBP14.96□□□□□ -0.01
USP47-207ENST00000527733 CYGBQ8WWM9 190 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 SIPA1Q96FS4 1042 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 NDOR1Q9UHB4 597 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 COL4A5P29400 1685 aa14.96□□□□□ -0.01
USP47-207ENST00000527733 COX4I1P13073 169 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 FAM189BP81408 668 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 ILF3Q12906 894 aaKnown RBP eCLIP14.96□□□□□ -0.027e-8■■■□□ 14.9
USP47-207ENST00000527733 NAE1Q13564 534 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 CYTH1Q15438 398 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 CCDC85BQ15834 202 aaPredicted RBP14.96□□□□□ -0.02
USP47-207ENST00000527733 WASHC2DQ5SRD0 308 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 SMARCD2Q92925 531 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 IMP4Q96G21 291 aaKnown RBP14.96□□□□□ -0.02
USP47-207ENST00000527733 NKX2-4Q9H2Z4 354 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 ZDHHC3Q9NYG2 299 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 SLC17A6Q9P2U8 582 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 SLC2A6Q9UGQ3 507 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 LEF1Q9UJU2 399 aaPredicted RBP14.96□□□□□ -0.02
USP47-207ENST00000527733 ENTPD4Q9Y227 616 aa14.96□□□□□ -0.02
USP47-207ENST00000527733 HNRNPRO43390 633 aaKnown RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 MAFKO60675 156 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 PAPSS2O95340 614 aaPredicted RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 CACNA2D1P54289 1103 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 LMAN2Q12907 356 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 LCP2Q13094 533 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 CAND1Q86VP6 1230 aaKnown RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 RELL1Q8IUW5 271 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 RP9Q8TA86 221 aaKnown RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 CLSTN3Q9BQT9 956 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 CLDN7O95471 211 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 IDO1P14902 403 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 ZNF23P17027 643 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 GCKP35557 465 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 GRM2Q14416 872 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 MAPKAPK3Q16644 382 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 TCHHL1Q5QJ38 904 aaPredicted RBP14.95□□□□□ -0.02
USP47-207ENST00000527733 WLSQ5T9L3 541 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 MAGED4Q96JG8 741 aa14.95□□□□□ -0.02
USP47-207ENST00000527733 ATG10Q9H0Y0 220 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms