RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ABCD2Q9UBJ2 740 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 CDH7Q9ULB5 785 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 C1orf232A0A0U1RR37 186 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 FXYD1O00168 92 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 ACOX3O15254 700 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 MSI1O43347 362 aaKnown RBP12.44□□□□□ -0.42
CAPN1-208ENST00000527323 ACRP10323 421 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 DCKP27707 260 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 DIO3P55073 304 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 ARPP19P56211 112 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 PHEXP78562 749 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 ECT2LQ008S8 904 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 TLE2Q04725 743 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 RAB41Q5JT25 222 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 HABP4Q5JVS0 413 aaKnown RBP12.44□□□□□ -0.42
CAPN1-208ENST00000527323 CCDC117Q8IWD4 279 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-208ENST00000527323 ZC3H7AQ8IWR0 971 aaKnown RBP12.44□□□□□ -0.42
CAPN1-208ENST00000527323 L3HYPDHQ96EM0 354 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 ADNPQ9H2P0 1102 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 SLC38A7Q9NVC3 462 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 MARCH4Q9P2E8 410 aaPredicted RBP12.44□□□□□ -0.42
CAPN1-208ENST00000527323 KLHL42Q9P2K6 505 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 SH3BP1Q9Y3L3 701 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 TIMM22Q9Y584 194 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 KCTD3Q9Y597 815 aa12.44□□□□□ -0.42
CAPN1-208ENST00000527323 NBNO60934 754 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CAPN15O75808 1086 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CCNA2P20248 432 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CCR1P32246 355 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 RFC2P35250 354 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CD97P48960 835 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 ARSDP51689 593 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CYBRD1Q53TN4 286 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 SCIMPQ6UWF3 145 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 SPRED1Q7Z699 444 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 SLAIN1Q8ND83 568 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 TMEM74Q96NL1 305 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 KLHL5Q96PQ7 755 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 TMEM209Q96SK2 561 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 SEZ6LQ9BYH1 1024 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 FANCEQ9HB96 536 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 SEMA4BQ9NPR2 832 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-208ENST00000527323 B4GAT1O43505 415 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CLASP2O75122 1294 aaKnown RBP12.43□□□□□ -0.42
CAPN1-208ENST00000527323 S1PR4O95977 384 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 BCL10O95999 233 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 ZNF12P17014 697 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 BMXP51813 675 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 TPD52P55327 224 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-208ENST00000527323 ITGADQ13349 1161 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 TGFBIQ15582 683 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CCNYL2Q5T2Q4 361 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 TBC1D21Q8IYX1 336 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CENPSQ8N2Z9 138 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 TTC16Q8NEE8 873 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 BPIFB6Q8NFQ5 453 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 SCAMP5Q8TAC9 235 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 GPR152Q8TDT2 470 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 ANKRD12Q6UB98 2062 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 SCN5AQ14524 2016 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 SUPT3HB4E1H0 165 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 ELK4P28324 431 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 FOXD4Q12950 439 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-208ENST00000527323 NR1D2Q14995 579 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 AASDHQ4L235 1098 aaPredicted RBP12.43□□□□□ -0.42
CAPN1-208ENST00000527323 XKR4Q5GH76 650 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 SDHAF4Q5VUM1 108 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 ANKRD26P1Q6NSI1 321 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 DCDC5Q6ZRR9 648 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 BHLHA9Q7RTU4 235 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 KLHDC8BQ8IXV7 354 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 DCP1BQ8IZD4 617 aaKnown RBP12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CLEC4FQ8N1N0 589 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 OR13J1Q8NGT2 312 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 MYLPFQ96A32 169 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 CHID1Q9BWS9 393 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 ARMC7Q9H6L4 198 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 POLG2Q9UHN1 485 aa12.43□□□□□ -0.42
CAPN1-208ENST00000527323 KANSL1LA0AUZ9 987 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 HHLA1C9JL84 531 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 IDO1P14902 403 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 PORP16435 677 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-208ENST00000527323 ITGB8P26012 769 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 GNA12Q03113 381 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 RELAQ04206 551 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 BFSP2Q13515 415 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 MOGQ16653 247 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 NANOGP8Q6NSW7 305 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 TMEM214Q6NUQ4 689 aaKnown RBP12.42□□□□□ -0.42
CAPN1-208ENST00000527323 BLOC1S3Q6QNY0 202 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 TFAP2DQ7Z6R9 452 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 PXYLP1Q8TE99 480 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 LINC01599Q8WXQ3 324 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 TMEM125Q96AQ2 219 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 NRBF2Q96F24 287 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 TBATAQ96M53 351 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 MUS81Q96NY9 551 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 ASB2Q96Q27 587 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 BDH2Q9BUT1 245 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 SLC25A51Q9H1U9 297 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms