RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 CCDC83Q8IWF9 413 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 HVCN1Q96D96 273 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 C14orf79Q96F83 325 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 SGCZQ96LD1 299 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 CEP295NLQ96MC4 621 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 TCHPQ9BT92 498 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 EFHD1Q9BUP0 239 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 CDT1Q9H211 546 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 ZBTB40Q9NUA8 1239 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 EHD2Q9NZN4 543 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 PPP4R1LQ9P1A2 415 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 KCND3Q9UK17 655 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 ZFR2Q9UPR6 939 aaKnown RBP7.1□□□□□ -1.27
NEDD8-203ENST00000524927 MED16Q9Y2X0 877 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 PRRC2AP48634 2157 aaKnown RBP7.1□□□□□ -1.27
NEDD8-203ENST00000524927 TGP01266 2768 aa7.1□□□□□ -1.27
NEDD8-203ENST00000524927 MYH10P35580 1976 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 CUBNO60494 3623 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 PRSS29PA6NIE9 313 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 D6RAR5 112 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 LRRTM2O43300 516 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 ZG16O60844 167 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 PPP6R2O75170 966 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 IL18RAPO95256 599 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 SLC6A2P23975 617 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 CYP2F1P24903 491 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 MGAT1P26572 445 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 MXRA7P84157 204 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 TSPY1Q01534 308 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 BTKQ06187 659 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 SLC13A2Q13183 592 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 FAM209BQ5JX69 171 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 TMEM198Q66K66 360 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 GPRIN1Q7Z2K8 1008 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 GSPT2Q8IYD1 628 aaKnown RBP7.09□□□□□ -1.27
NEDD8-203ENST00000524927 FUKQ8N0W3 1084 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 NAGSQ8N159 534 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 OR2C3Q8N628 320 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 DEPTORQ8TB45 409 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 ETNPPLQ8TBG4 499 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 CMKLR1Q99788 373 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 FOXC2Q99958 501 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 ZMYND12Q9H0C1 365 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 ARFGAP3Q9NP61 516 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 ANKEF1Q9NU02 776 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 TMLHEQ9NVH6 421 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 ELOVL2Q9NXB9 296 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 FAM30AQ9NZY2 134 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 CITO14578 2027 aa7.09□□□□□ -1.27
NEDD8-203ENST00000524927 TIMM44O43615 452 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 PLATP00750 562 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 MCF2P10911 925 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 MX1P20591 662 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 CHMLP26374 656 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 ETV5P41161 510 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 ZNF135P52742 658 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-203ENST00000524927 EFNA5P52803 228 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 ARFIP2P53365 341 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 MAPK10P53779 464 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 MFAP3P55082 362 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 FOXD4Q12950 439 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-203ENST00000524927 STK3Q13188 491 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 DAG1Q14118 895 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 ZBTB6Q15916 424 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 CFAP221Q4G0U5 840 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 VWA2Q5GFL6 755 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 ZNF776Q68DI1 518 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-203ENST00000524927 CIR1Q86X95 450 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-203ENST00000524927 CACNA2D3Q8IZS8 1091 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 TMTC2Q8N394 836 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 MPP5Q8N3R9 675 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 FANCBQ8NB91 859 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 OR10H5Q8NGA6 315 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 GANCQ8TET4 914 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 KIAA1143Q96AT1 154 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-203ENST00000524927 SPATA17Q96L03 361 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 CCDC3Q9BQI4 270 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 CPEB1Q9BZB8 566 aaKnown RBP7.08□□□□□ -1.28
NEDD8-203ENST00000524927 IMPG2Q9BZV3 1241 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 VPS11Q9H270 941 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 PABPC3Q9H361 631 aaKnown RBP7.08□□□□□ -1.28
NEDD8-203ENST00000524927 SYNDIG1Q9H7V2 258 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 GPN2Q9H9Y4 310 aaPredicted RBP7.08□□□□□ -1.28
NEDD8-203ENST00000524927 MCCC2Q9HCC0 563 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 FBXL12Q9NXK8 326 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 TLK1Q9UKI8 766 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 FZD4Q9ULV1 537 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 UBQLN1Q9UMX0 589 aaKnown RBP7.08□□□□□ -1.28
NEDD8-203ENST00000524927 CSNK1G3Q9Y6M4 447 aa7.08□□□□□ -1.28
NEDD8-203ENST00000524927 MEGF8Q7Z7M0 2845 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 NBEAL2Q6ZNJ1 2754 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 CYP3A7-CYP3A51PA0A087WV96 503 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 DRGXA6NNA5 263 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 F5H423 210 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 F8W8V4 182 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 MYO1CO00159 1063 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 IFRD1O00458 451 aaPredicted RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 MUSKO15146 869 aa7.07□□□□□ -1.28
NEDD8-203ENST00000524927 CASC3O15234 703 aaKnown RBP7.07□□□□□ -1.28
NEDD8-203ENST00000524927 LRCH4O75427 683 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms