RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	RIN3	Q8TB24	985 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	ITFG1	Q8TB96	612 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	FAM45A	Q8TCE6	357 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	GPR152	Q8TDT2	470 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	FGF13	Q92913	245 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	USP13	Q92995	863 aa	Predicted RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	ATP6V1E2	Q96A05	226 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	C18orf25	Q96B23	403 aa	Predicted RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	ZNF512	Q96ME7	567 aa	Predicted RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	RANBP9	Q96S59	729 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	TSPAN18	Q96SJ8	248 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	VAT1	Q99536	393 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	PRPF18	Q99633	342 aa	Known RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	NPAS2	Q99743	824 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	HAUS8	Q9BT25	410 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	ANKRD60	Q9BZ19	345 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	TASP1	Q9H6P5	420 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	MEAF6	Q9HAF1	191 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	PNPLA3	Q9NST1	481 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	C20orf96	Q9NUD7	363 aa	Predicted RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	PIGV	Q9NUD9	493 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	OLAH	Q9NV23	265 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	DUS2	Q9NX74	493 aa	Known RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	GALNT8	Q9NY28	637 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	TUBA8	Q9NY65	449 aa	Predicted RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	SEPT10	Q9P0V9	454 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	KLHL8	Q9P2G9	620 aa	Predicted RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	XPR1	Q9UBH6	696 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	APPL1	Q9UKG1	709 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	CDH7	Q9ULB5	785 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	CNOT6	Q9ULM6	557 aa	Known RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	CA14	Q9ULX7	337 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	UBQLN1	Q9UMX0	589 aa	Known RBP	7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	NEU3	Q9UQ49	428 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033	SIT1	Q9Y3P8	196 aa		7.81	□□□□□ -1.16
SPIDR-223	ENST00000524033		A0A087X1B8	175 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	HEATR9	A2RTY3	570 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	KCNU1	A8MYU2	1149 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033		E7ENX8	843 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	PROB1	E7EW31	1015 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	FAM72C	H0Y354	149 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033		H7C4K7	107 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	KCNK1	O00180	336 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	DLGAP1	O14490	977 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	PRRG1	O14668	218 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	PHGDH	O43175	533 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	HNRNPR	O43390	633 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	USP12	O75317	370 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	TRMU	O75648	421 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	ABLIM3	O94929	683 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	H6PD	O95479	791 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	IMPDH2	P12268	514 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	SNRPB	P14678	240 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	ATP5F1	P24539	256 aa	Predicted RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	LMO2	P25791	158 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	ADRA1B	P35368	520 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	ARCN1	P48444	511 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	TKTL1	P51854	596 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	NAGLU	P54802	743 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	ARPP19	P56211	112 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	ADIG	Q0VDE8	80 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	GALNT1	Q10472	559 aa	Predicted RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	CDH17	Q12864	832 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	DCTN2	Q13561	401 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	TRIM25	Q14258	630 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	SLC14A2	Q15849	920 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	FAM72A	Q5TYM5	149 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	BSPRY	Q5W0U4	402 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	PM20D1	Q6GTS8	502 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	NAPEPLD	Q6IQ20	393 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	SLC8B1	Q6J4K2	584 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	FAM72D	Q6L9T8	149 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	IYD	Q6PHW0	289 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	FIGNL1	Q6PIW4	674 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	CNST	Q6PJW8	725 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	PAOX	Q6QHF9	649 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	MTSS1L	Q765P7	747 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	PDZD4	Q76G19	769 aa	Predicted RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	PIWIL4	Q7Z3Z4	852 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	FAM72B	Q86X60	149 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	RGL4	Q8IZJ4	473 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	PACRGL	Q8N7B6	248 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	GOLM1	Q8NBJ4	401 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	CEP70	Q8NHQ1	597 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	SPPL2B	Q8TCT7	592 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	SLC2A14	Q8TDB8	520 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	NDRG1	Q92597	394 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	LPGAT1	Q92604	370 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	EDEM1	Q92611	657 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	FGF14	Q92915	247 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	GFM2	Q969S9	779 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	MOCOS	Q96EN8	888 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	ATXN7L3B	Q96GX2	97 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	FAR2	Q96K12	515 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	MARK4	Q96L34	752 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	TEKT5	Q96M29	485 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	ZNF560	Q96MR9	790 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	RPP25	Q9BUL9	199 aa	Known RBP	7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	DUSP16	Q9BY84	665 aa		7.8	□□□□□ -1.16
SPIDR-223	ENST00000524033	MRPL1	Q9BYD6	325 aa	Known RBP	7.8	□□□□□ -1.16

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms