RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 ILF3Q12906 894 aaKnown RBP eCLIP12.39□□□□□ -0.43
HDAC2-211ENST00000521233 CALCOCO2Q13137 446 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 GTF2H3Q13889 308 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 LRP8Q14114 963 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 SHBQ15464 509 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 RSPO4Q2I0M5 234 aaPredicted RBP12.39□□□□□ -0.43
HDAC2-211ENST00000521233 ATP13A5Q4VNC0 1218 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 CCDC38Q502W7 563 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 PRRT3Q5FWE3 981 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 PRAMEF14Q5SWL7 426 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 SNX20Q7Z614 316 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 CTAGE6Q86UF2 777 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 TRIM74Q86UV6 250 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 GALNT13Q8IUC8 556 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 CEP112Q8N8E3 955 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 ZNF398Q8TD17 642 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 HEXDCQ8WVB3 486 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 SCARF2Q96GP6 870 aaPredicted RBP12.39□□□□□ -0.43
HDAC2-211ENST00000521233 TTC25Q96NG3 672 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 OR2M4Q96R27 311 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 LRRC61Q9BV99 259 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 DUSP23Q9BVJ7 150 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 ASB8Q9H765 288 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 CYP4F12Q9HCS2 524 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 EVA1BQ9NVM1 165 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 TRNAU1APQ9NX07 287 aaKnown RBP12.39□□□□□ -0.43
HDAC2-211ENST00000521233 SYBUQ9NX95 663 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 NLGN3Q9NZ94 848 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 CNOT6Q9ULM6 557 aaKnown RBP12.39□□□□□ -0.43
HDAC2-211ENST00000521233 SOX13Q9UN79 622 aa12.39□□□□□ -0.43
HDAC2-211ENST00000521233 ASCC3Q8N3C0 2202 aaKnown RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 MAGEB16A2A368 324 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 SDR42E2A6NKP2 422 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 CFAP99D6REC4 459 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 LMO7DNF2Z398 122 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 CTIFO43310 598 aaKnown RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 RAD51CO43502 376 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 SDC3O75056 442 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 ANXA6P08133 673 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 RALBP11234 206 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 CSRP1P21291 193 aaKnown RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 IVDP26440 423 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 AKT1P31749 480 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 PPARGP37231 505 aaPredicted RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 MAGEA3P43357 314 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 PRAMEP78395 509 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 TMPRSS15P98073 1019 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 XIAPP98170 497 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 CACNG1Q06432 222 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 PTPRCAPQ14761 206 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 ZNF542PQ5EBM4 170 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 AARS2Q5JTZ9 985 aaKnown RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 GPRC6AQ5T6X5 926 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 CASC4Q6P4E1 433 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 DBX2Q6ZNG2 339 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 KANSL1Q7Z3B3 1105 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 RD3Q7Z3Z2 195 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 CAND1Q86VP6 1230 aaKnown RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 GKN2Q86XP6 184 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 RBFAQ8N0V3 343 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 PDIK1LQ8N165 341 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 NXPE1Q8N323 547 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 OR13J1Q8NGT2 312 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 LMX1AQ8TE12 382 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 SETD7Q8WTS6 366 aaKnown RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 SCG3Q8WXD2 468 aaKnown RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 TSACCQ96A04 125 aaPredicted RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 ZNF514Q96K75 400 aaPredicted RBP12.38□□□□□ -0.43
HDAC2-211ENST00000521233 TTC1Q99614 292 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 CDC6Q99741 560 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 ERP44Q9BS26 406 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 NAT9Q9BTE0 207 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 KIFC1Q9BW19 673 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 GSDMCQ9BYG8 508 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 TRIM31Q9BZY9 425 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 OR2AG1Q9H205 316 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 TRIM39Q9HCM9 518 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 NCKIPSDQ9NZQ3 722 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 WHRNQ9P202 907 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 SUFUQ9UMX1 484 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 DOLKQ9UPQ8 538 aa12.38□□□□□ -0.43
HDAC2-211ENST00000521233 COL5A1P20908 1838 aaPredicted RBP12.37□□□□□ -0.43
HDAC2-211ENST00000521233 LAMA1P25391 3075 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 TRBV5-4A0A0C4DH59 114 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 AGAP14A8MT82 685 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 GOLGA8MH3BSY2 632 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 TPP1O14773 563 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 SCAMP1O15126 338 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 MSH3P20585 1137 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 GNPDA1P46926 289 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 ITGA8P53708 1063 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 ARL4CP56559 192 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 CAV1Q03135 178 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 BNIP3Q12983 259 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 PUM1Q14671 1186 aaKnown RBP eCLIP12.37□□□□□ -0.43
HDAC2-211ENST00000521233 HIF1AQ16665 826 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 ZRANB3Q5FWF4 1079 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 LYPLAL1Q5VWZ2 237 aa12.37□□□□□ -0.43
HDAC2-211ENST00000521233 HIBCHQ6NVY1 386 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms