RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 ISL1P61371 349 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 COASYQ13057 564 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 CHAF1BQ13112 559 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 WTAPQ15007 396 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 DECR1Q16698 335 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 NSUN5P2Q63ZY6 315 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 PMS2CLQ68D20 193 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 C18orf63Q68DL7 685 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 SPSB3Q6PJ21 355 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 BRAT1Q6PJG6 821 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 SZRD1Q7Z422 152 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 RBM23Q86U06 439 aaKnown RBP5.06□□□□□ -1.6
SKP1-208ENST00000521216 SATL1Q86VE3 508 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 ZNF441Q8N8Z8 693 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 KCNH5Q8NCM2 988 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 TAAR8Q969N4 342 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 MOAP1Q96BY2 351 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 RETREG1Q9H6L5 497 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 PADI3Q9ULW8 664 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 CMAHPQ9Y471 501 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 PCDHAC2Q9Y5I4 1007 aa5.06□□□□□ -1.6
SKP1-208ENST00000521216 A0A1W2PQ09 198 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 ANKRD28O15084 1053 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 TSPAN9O75954 239 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 ACTN1P12814 892 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 MYOD1P15172 320 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 PSMB10P40306 273 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 IL15P40933 162 aaPredicted RBP5.05□□□□□ -1.6
SKP1-208ENST00000521216 APOBEC1P41238 236 aaKnown RBP5.05□□□□□ -1.6
SKP1-208ENST00000521216 MFAP4P55083 255 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 RRP1P56182 461 aaKnown RBP5.05□□□□□ -1.6
SKP1-208ENST00000521216 COG7P83436 770 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 RELQ04864 619 aaPredicted RBP5.05□□□□□ -1.6
SKP1-208ENST00000521216 SREBF2Q12772 1141 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 CUL4AQ13619 759 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 IRF3Q14653 427 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 MYLK3Q32MK0 819 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 PCGF3Q3KNV8 242 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 DUSP28Q4G0W2 176 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 SOWAHCQ53LP3 525 aaPredicted RBP5.05□□□□□ -1.6
SKP1-208ENST00000521216 SPATA1Q5VX52 437 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 CFAP161Q6P656 301 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 UNQ6126/PRO20091Q6UXV3 157 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 CFAP77Q6ZQR2 320 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 MAP7D3Q8IWC1 876 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 RPAP2Q8IXW5 612 aaPredicted RBP5.05□□□□□ -1.6
SKP1-208ENST00000521216 HACE1Q8IYU2 909 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 TAGAPQ8N103 731 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 OR5R1Q8NH85 324 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 GSDMBQ8TAX9 411 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 UTP15Q8TED0 518 aaKnown RBP5.05□□□□□ -1.6
SKP1-208ENST00000521216 DNAAF4Q8WXU2 420 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 ABTB1Q969K4 478 aaPredicted RBP5.05□□□□□ -1.6
SKP1-208ENST00000521216 CDCA5Q96FF9 252 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 CALML4Q96GE6 196 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 KRTAP9-8Q9BYQ0 159 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 UBTD1Q9HAC8 227 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 UBA2Q9UBT2 640 aaPredicted RBP5.05□□□□□ -1.6
SKP1-208ENST00000521216 POU2F3Q9UKI9 436 aa5.05□□□□□ -1.6
SKP1-208ENST00000521216 PTPRCP08575 1304 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 ARHGEF40Q8TER5 1519 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 hCG_1807616A0A1W2PRN6 198 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 HMGB1P1B2RPK0 211 aaPredicted RBP5.04□□□□□ -1.6
SKP1-208ENST00000521216 B4DLN1 442 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 ZNF587BE7ETH6 402 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 KCNN4O15554 427 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 PLPP2O43688 288 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 GJB3O75712 270 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 DDNO94850 711 aaPredicted RBP5.04□□□□□ -1.6
SKP1-208ENST00000521216 PON1P27169 355 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 ACADLP28330 430 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 FASLGP48023 281 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 GPR143P51810 404 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 MRPL12P52815 198 aaKnown RBP5.04□□□□□ -1.6
SKP1-208ENST00000521216 CLDN20P56880 219 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 ZBTB17Q13105 803 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 PRKG2Q13237 762 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 TMEM35AQ53FP2 167 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 NRROSQ86YC3 692 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 RASGEF1CQ8N431 466 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 EMC1Q8N766 993 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 BBS10Q8TAM1 723 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 SPATA20Q8TB22 786 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 SLC38A5Q8WUX1 472 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 SLC44A1Q8WWI5 657 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 PIGTQ969N2 578 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 IL17FQ96PD4 163 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 TMEM39BQ9GZU3 492 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 CSTL1Q9H114 145 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 TMX4Q9H1E5 349 aaPredicted RBP5.04□□□□□ -1.6
SKP1-208ENST00000521216 MAGIXQ9H6Y5 334 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 DDX31Q9H8H2 851 aaKnown RBP5.04□□□□□ -1.6
SKP1-208ENST00000521216 DBNLQ9UJU6 430 aaKnown RBP5.04□□□□□ -1.6
SKP1-208ENST00000521216 PCDHGB4Q9UN71 923 aa5.04□□□□□ -1.6
SKP1-208ENST00000521216 IGHV4OR15-8A0A075B7B6 117 aa5.03□□□□□ -1.6
SKP1-208ENST00000521216 AGAP14A8MT82 685 aa5.03□□□□□ -1.6
SKP1-208ENST00000521216 SMTNL1A8MU46 457 aa5.03□□□□□ -1.6
SKP1-208ENST00000521216 FAM90A26D6RGX4 464 aa5.03□□□□□ -1.6
SKP1-208ENST00000521216 CTDSP2O14595 271 aa5.03□□□□□ -1.6
SKP1-208ENST00000521216 CAMTA2O94983 1202 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms