RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 PLAC1Q9HBJ0 212 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 TM9SF3Q9HD45 589 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 AASDHPPTQ9NRN7 309 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 GPR27Q9NS67 375 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 ARGLU1Q9NWB6 273 aaPredicted RBP9.4□□□□□ -0.9
CLN8-203ENST00000518780 ZDHHC3Q9NYG2 299 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 NINJ2Q9NZG7 142 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 ZFATQ9P243 1243 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 FETUBQ9UGM5 382 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 CD84Q9UIB8 345 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 CRLS1Q9UJA2 301 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 PILRBQ9UKJ0 227 aa9.4□□□□□ -0.9
CLN8-203ENST00000518780 CNOT6Q9ULM6 557 aaKnown RBP9.4□□□□□ -0.9
CLN8-203ENST00000518780 CORO1CQ9ULV4 474 aaPredicted RBP9.4□□□□□ -0.9
CLN8-203ENST00000518780 DNMT3AQ9Y6K1 912 aaPredicted RBP9.4□□□□□ -0.9
CLN8-203ENST00000518780 IGLV3-16A0A075B6K0 115 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 TCRBV9S1A1TA0A576 114 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 CCDC78A2IDD5 438 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 POM121BA6NF01 834 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 FAM159BA6NKW6 160 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 FADS2P1A8MWK0 482 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 H3BMM5 538 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 TLR4O00206 839 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 DFNA5O60443 496 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 UGT1A9O60656 530 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 KCNJ13O60928 360 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 NDUFS3O75489 264 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 AP2A2O94973 939 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 FAM153BP0C7A2 387 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 MYBL2P10244 700 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 ZNF7P17097 686 aaPredicted RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 UGT1A6P19224 532 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 UGT1A1P22309 533 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 UGT1A4P22310 534 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 ITPKAP23677 461 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 ACRV1P26436 265 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 SSTR1P30872 391 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 UGT1A3P35503 534 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 UGT1A5P35504 534 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 LEPRP48357 1165 aaKnown RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 BLKP51451 505 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 C21orf59P57076 290 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 TCF15Q12870 199 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 SRSF5Q13243 272 aaKnown RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 NFATC4Q14934 902 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 DUOXA1Q1HG43 343 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 KLHL38Q2WGJ6 581 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 FAM153CQ494X1 144 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 HSP90AA5PQ58FG0 334 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 HP1BP3Q5SSJ5 553 aaPredicted RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 GPRC6AQ5T6X5 926 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 TEDDM1Q5T9Z0 273 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 PACS1Q6VY07 963 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 MACC1Q6ZN28 852 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 PRR23BQ6ZRT6 265 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 Q6ZSR6 202 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 PTAR1Q7Z6K3 402 aaPredicted RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 SERPINA9Q86WD7 417 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 HEATR4Q86WZ0 1026 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 CILP2Q8IUL8 1156 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 OXR1Q8N573 874 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 DEFB119Q8N690 84 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 PLA2G15Q8NCC3 412 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 C2CD4AQ8NCU7 369 aaPredicted RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 FUBP1Q96AE4 644 aaKnown RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 DCUN1D1Q96GG9 259 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 SCARF2Q96GP6 870 aaPredicted RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 AGAP2Q99490 1192 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 MIR1-1HGQ9H1L0 117 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 ACSS3Q9H6R3 686 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 ERVMER34-1Q9H9K5 563 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 UGT1A7Q9HAW7 530 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 UGT1A10Q9HAW8 530 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 UGT1A8Q9HAW9 530 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 PPANQ9NQ55 473 aaKnown RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 TXNDC16Q9P2K2 825 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 FBXO5Q9UKT4 447 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 GPR34Q9UPC5 381 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 SLC17A4Q9Y2C5 497 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 PCDHB1Q9Y5F3 818 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 COMMD10Q9Y6G5 202 aa9.39□□□□□ -0.91
CLN8-203ENST00000518780 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.39□□□□□ -0.91
CLN8-203ENST00000518780 CACNA1HO95180 2353 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 SPTY2D1-AS1A0A0U1RR47 76 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 K7ESM1 405 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 PRMT5O14744 637 aaPredicted RBP9.38□□□□□ -0.91
CLN8-203ENST00000518780 RIPK2O43353 540 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 FOXD2O60548 495 aaPredicted RBP9.38□□□□□ -0.91
CLN8-203ENST00000518780 LRP3O75074 770 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 CDK14O94921 469 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 EPN2O95208 641 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 ESR1P03372 595 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 IVLP07476 585 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 RETP07949 1114 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 THEGLP0DJG4 465 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 ERVK-10P10266 1014 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 MSH3P20585 1137 aa9.38□□□□□ -0.91
CLN8-203ENST00000518780 RPS3P23396 243 aaKnown RBP eCLIP9.38□□□□□ -0.91
CLN8-203ENST00000518780 NBL1P41271 181 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms