RNA–Protein interactions for RNA: ENST00000514089.5

SNF8-212, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-212ENST00000514089 DPEP2Q9H4A9 486 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 FAM96AQ9H5X1 160 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 RMI1Q9H9A7 625 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 XAB2Q9HCS7 855 aaKnown RBP14.4□□□□□ -0.1
SNF8-212ENST00000514089 VPS18Q9P253 973 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 ATXN10Q9UBB4 475 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 GULP1Q9UBP9 304 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 PCOLCE2Q9UKZ9 415 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 CNOT6Q9ULM6 557 aaKnown RBP14.4□□□□□ -0.1
SNF8-212ENST00000514089 SLC17A4Q9Y2C5 497 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 NEU2Q9Y3R4 380 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 TCAF1Q9Y4C2 921 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 MAD1L1Q9Y6D9 718 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 USP34Q70CQ2 3546 aa14.4□□□□□ -0.1
SNF8-212ENST00000514089 EP300Q09472 2414 aaPredicted RBP14.4□□□□□ -0.1
SNF8-212ENST00000514089 PLXND1Q9Y4D7 1925 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 MAGEB16A2A368 324 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 MROH6A6NGR9 719 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 EFCAB8A8MWE9 144 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 CFAP99D6REC4 459 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 LMO7DNF2Z398 122 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 YY2O15391 372 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 GRID2O43424 1007 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 MTX2O75431 263 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 DUSP3P51452 185 aaPredicted RBP14.39□□□□□ -0.11
SNF8-212ENST00000514089 ZNF140P52738 457 aaPredicted RBP14.39□□□□□ -0.11
SNF8-212ENST00000514089 CRADDP78560 199 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 SIM1P81133 766 aaPredicted RBP14.39□□□□□ -0.11
SNF8-212ENST00000514089 TMEM115Q12893 351 aaPredicted RBP14.39□□□□□ -0.11
SNF8-212ENST00000514089 MSLNQ13421 630 aaPredicted RBP14.39□□□□□ -0.11
SNF8-212ENST00000514089 NFATC2Q13469 925 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 KCNJ11Q14654 390 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 GPR33Q49SQ1 333 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 TSTD2Q5T7W7 516 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 ANKRD22Q5VYY1 191 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 DBX2Q6ZNG2 339 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 CHST15Q7LFX5 561 aaPredicted RBP14.39□□□□□ -0.11
SNF8-212ENST00000514089 SNX20Q7Z614 316 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 TRAPPC5Q8IUR0 188 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 OTUD6BQ8N6M0 293 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 BBOF1Q8ND07 529 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 MCUQ8NE86 351 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 CDKN2AIPNLQ96HQ2 116 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 TBATAQ96M53 351 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 OR2M4Q96R27 311 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 CHRAC1Q9NRG0 131 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 TRNAU1APQ9NX07 287 aaKnown RBP14.39□□□□□ -0.11
SNF8-212ENST00000514089 NLGN3Q9NZ94 848 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 NCKIPSDQ9NZQ3 722 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 SIRPGQ9P1W8 387 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 GPR34Q9UPC5 381 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 BTBD3Q9Y2F9 522 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 UTP11Q9Y3A2 253 aaKnown RBP14.39□□□□□ -0.11
SNF8-212ENST00000514089 PRKAB1Q9Y478 270 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 OAS3Q9Y6K5 1087 aaKnown RBP14.39□□□□□ -0.11
SNF8-212ENST00000514089 SHROOM3Q8TF72 1996 aa14.39□□□□□ -0.11
SNF8-212ENST00000514089 FAM187AA6NFU0 413 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 GPR89AB7ZAQ6 455 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 DNALI1O14645 258 aaPredicted RBP14.38□□□□□ -0.11
SNF8-212ENST00000514089 TPP1O14773 563 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 TM4SF5O14894 197 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 TNFSF14O43557 240 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 SIGLEC6O43699 453 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 AVILO75366 819 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 KCNK5O95279 499 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 GPR89BP0CG08 455 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 MLNP12872 115 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 ZNF8P17098 575 aaPredicted RBP14.38□□□□□ -0.11
SNF8-212ENST00000514089 VCLP18206 1134 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 PAMP19021 973 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 PPARGP37231 505 aaPredicted RBP14.38□□□□□ -0.11
SNF8-212ENST00000514089 MAGEA6P43360 314 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 MRPS25P82663 173 aaKnown RBP14.38□□□□□ -0.11
SNF8-212ENST00000514089 CACNG1Q06432 222 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 CALCOCO2Q13137 446 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 FASTKD1Q53R41 847 aaKnown RBP14.38□□□□□ -0.11
SNF8-212ENST00000514089 DNAJC21Q5F1R6 531 aaKnown RBP14.38□□□□□ -0.11
SNF8-212ENST00000514089 PPM1JQ5JR12 505 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 GPRC6AQ5T6X5 926 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 SLC30A9Q6PML9 568 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 LVRNQ6Q4G3 990 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 CRTC3Q6UUV7 619 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 ADGRG6Q86SQ4 1221 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 PIP4P1Q86T03 277 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 OR4C6Q8NH72 309 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 PTCD2Q8WV60 388 aaKnown RBP14.38□□□□□ -0.11
SNF8-212ENST00000514089 HEXDCQ8WVB3 486 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 HDAC10Q969S8 669 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 SNF8Q96H20 258 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 COPS8Q99627 209 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 C19orf43Q9BQ61 176 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 TRIM51Q9BSJ1 452 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 CAAP1Q9H8G2 361 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 PNMA8BQ9ULN7 279 aaPredicted RBP14.38□□□□□ -0.11
SNF8-212ENST00000514089 OTOGLQ3ZCN5 2332 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 GON4LQ3T8J9 2241 aa14.38□□□□□ -0.11
SNF8-212ENST00000514089 SPAARA0A1B0GVQ0 90 aa14.37□□□□□ -0.11
SNF8-212ENST00000514089 SMAPO00193 183 aa14.37□□□□□ -0.11
SNF8-212ENST00000514089 TRIM38O00635 465 aa14.37□□□□□ -0.11
SNF8-212ENST00000514089 KMOO15229 486 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms