RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 RAD51Q06609 339 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 PARGQ86W56 976 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 ANKRD42Q8N9B4 389 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 ZNF548Q8NEK5 533 aaPredicted RBP17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 SIGLEC10Q96LC7 697 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 APOLD1Q96LR9 279 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 ZNF317Q96PQ6 595 aaPredicted RBP17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 SLC39A8Q9C0K1 460 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 NKIRAS1Q9NYS0 192 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 UBA2Q9UBT2 640 aaPredicted RBP17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 PRDM4Q9UKN5 801 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 COQ6Q9Y2Z9 468 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 TTLL3Q9Y4R7 772 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 AK5Q9Y6K8 562 aa17.04■□□□□ 0.32
AP004609.1-201ENST00000498872 K7ESM1 405 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 PRPF4O43172 522 aaKnown RBP eCLIP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 TIMP2P16035 220 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 DRD4P21917 467 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 PSMB4P28070 264 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 IGFALSP35858 605 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 GARSP41250 739 aaKnown RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 SLC18A1P54219 525 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 HNRNPKP61978 463 aaKnown RBP eCLIP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 ILKQ13418 452 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 MPP2Q14168 576 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 DCP2Q8IU60 420 aaKnown RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 RBFAQ8N0V3 343 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 FAM174AQ8TBP5 190 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 CXorf40AQ8TE69 158 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 NXPE2Q96DL1 559 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 MRRFQ96E11 262 aaKnown RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 LENG8Q96PV6 779 aaPredicted RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 SMC6Q96SB8 1091 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 EBNA1BP2Q99848 306 aaKnown RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 CEP41Q9BYV8 373 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 FAM107BQ9H098 131 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 PDFQ9HBH1 243 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 MBNL1Q9NR56 388 aaKnown RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 NLGN3Q9NZ94 848 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 KLHL8Q9P2G9 620 aaPredicted RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 CLCA2Q9UQC9 943 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 URB1O60287 2271 aaKnown RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 KCNK1O00180 336 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 SCAMP1O15126 338 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 TM7SF2O76062 418 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 C1QAP02745 245 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 CSF2P04141 144 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 ALPPL2P10696 532 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 NME1P15531 152 aaKnown RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 JUNDP17535 347 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 PAPOLAP51003 745 aaKnown RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 PFN3P60673 137 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 LRRC8BQ6P9F7 803 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 MGARPQ8TDB4 240 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 DYDC1Q8WWB3 177 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 SLC44A1Q8WWI5 657 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 IFT43Q96FT9 208 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 CRELD1Q96HD1 420 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 SGSM3Q96HU1 749 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 VAT1Q99536 393 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 TCEAL2Q9H3H9 227 aaPredicted RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 PLAC1Q9HBJ0 212 aa17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 SSU72Q9NP77 194 aaKnown RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 PNMA8BQ9ULN7 279 aaPredicted RBP17.03■□□□□ 0.32
AP004609.1-201ENST00000498872 NEMP2A6NFY4 417 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 PRKCGP05129 697 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 XPAP23025 273 aaPredicted RBP17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 GRIA1P42261 906 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 RGRP47804 291 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 THOP1P52888 689 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 EIF2B5Q13144 721 aaKnown RBP17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 LRRC14Q15048 493 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 DEFB133Q30KQ1 61 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 KBTBD12Q3ZCT8 623 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 UNC5AQ6ZN44 842 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 ARHGAP36Q6ZRI8 547 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 PID1Q7Z2X4 250 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 LMX1AQ8TE12 382 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 MZB1Q8WU39 189 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 TRHDEQ9UKU6 1024 aa17.02■□□□□ 0.31
AP004609.1-201ENST00000498872 LY6G6EA0A0G2JKS1 128 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 IQANK1A0A1B0GTG1 560 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 F5H423 210 aaPredicted RBP17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 H3BM21 787 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 DFFAO00273 331 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 AQP9O43315 295 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 PRAMEF11O60813 436 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 CKMT1AP12532 417 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 NDST2P52849 883 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 C1orf61Q13536 156 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 TCEA2Q15560 299 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 QPCTQ16769 361 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 ITPRIPL1Q6GPH6 555 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 CAMK1DQ8IU85 385 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 MPP5Q8N3R9 675 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 LZTR1Q8N653 840 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 DENND6BQ8NEG7 585 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 GSDMBQ8TAX9 411 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 CKAP2Q8WWK9 683 aa17.01■□□□□ 0.31
AP004609.1-201ENST00000498872 ASB12Q8WXK4 309 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms