RNA–Protein interactions for RNA: ENST00000497415.1

RPN1-208, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 547 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-208ENST00000497415 BPIFA1Q9NP55 256 aa18.5■□□□□ 0.55
RPN1-208ENST00000497415 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.5■□□□□ 0.55
RPN1-208ENST00000497415 ATXN10Q9UBB4 475 aa18.5■□□□□ 0.55
RPN1-208ENST00000497415 TMPRSS11EQ9UL52 423 aa18.5■□□□□ 0.55
RPN1-208ENST00000497415 ANKRD11Q6UB99 2663 aaPredicted RBP18.5■□□□□ 0.55
RPN1-208ENST00000497415 ZZEF1O43149 2961 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 CHUKO15111 745 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 PPFIA2O75334 1257 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 ZNF8P17098 575 aaPredicted RBP18.49■□□□□ 0.55
RPN1-208ENST00000497415 PDX1P52945 283 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 MAZP56270 477 aaKnown RBP18.49■□□□□ 0.55
RPN1-208ENST00000497415 B4GALNT1Q00973 533 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 MSLNQ13421 630 aaPredicted RBP18.49■□□□□ 0.55
RPN1-208ENST00000497415 NR1D2Q14995 579 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 SEL1L2Q5TEA6 688 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 GLT6D1Q7Z4J2 308 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 ZNF438Q7Z4V0 828 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 ADGRG6Q86SQ4 1221 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 PHYKPLQ8IUZ5 450 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 GFM1Q96RP9 751 aaKnown RBP18.49■□□□□ 0.55
RPN1-208ENST00000497415 ARNT2Q9HBZ2 717 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 IL26Q9NPH9 171 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 RAXQ9Y2V3 346 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 PRKAB1Q9Y478 270 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 URB1O60287 2271 aaKnown RBP18.49■□□□□ 0.55
RPN1-208ENST00000497415 KIF26BQ2KJY2 2108 aa18.49■□□□□ 0.55
RPN1-208ENST00000497415 ZNF106Q9H2Y7 1883 aaKnown RBP18.48■□□□□ 0.55
RPN1-208ENST00000497415 GRID2O43424 1007 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 BRINP1O60477 761 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 RPLP0P05388 317 aaKnown RBP18.48■□□□□ 0.55
RPN1-208ENST00000497415 SPAM1P38567 509 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 LSSP48449 732 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 OLIG2Q13516 323 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 PARP6Q2NL67 630 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 ATP13A5Q4VNC0 1218 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 ZNF648Q5T619 568 aaPredicted RBP18.48■□□□□ 0.55
RPN1-208ENST00000497415 CHST15Q7LFX5 561 aaPredicted RBP18.48■□□□□ 0.55
RPN1-208ENST00000497415 SPRED1Q7Z699 444 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 CCNJLQ8IV13 435 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 FAM71DQ8N9W8 422 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 PATE1Q8WXA2 126 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 ATXN7L3BQ96GX2 97 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 OR2AG1Q9H205 316 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 POLR1BQ9H9Y6 1135 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 ARFGAP3Q9NP61 516 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 LZTFL1Q9NQ48 299 aa18.48■□□□□ 0.55
RPN1-208ENST00000497415 A0A1W2PNU3 283 aaPredicted RBP18.47■□□□□ 0.55
RPN1-208ENST00000497415 D6RAR5 112 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 B4GAT1O43505 415 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 VEGFDO43915 354 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 DXOO77932 396 aaKnown RBP18.47■□□□□ 0.55
RPN1-208ENST00000497415 CLCNKAP51800 687 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 GDF10P55107 478 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 RPS6KA1Q15418 735 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 TAF1AQ15573 450 aaPredicted RBP18.47■□□□□ 0.55
RPN1-208ENST00000497415 KCTD11Q693B1 232 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 DENND5AQ6IQ26 1287 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 IGF2-ASQ6U949 168 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 SLC13A5Q86YT5 568 aaPredicted RBP18.47■□□□□ 0.55
RPN1-208ENST00000497415 LSMEM2Q8N112 164 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 Q8N9G6 341 aaPredicted RBP18.47■□□□□ 0.55
RPN1-208ENST00000497415 RTP4Q96DX8 246 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 APOL2Q9BQE5 337 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 TMEM121Q9BTD3 319 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 FRMD8P1Q9BZ68 369 aaPredicted RBP18.47■□□□□ 0.55
RPN1-208ENST00000497415 SYNDIG1Q9H7V2 258 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 GRPEL1Q9HAV7 217 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 PKP3Q9Y446 797 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 PKD1L2Q7Z442 2459 aa18.47■□□□□ 0.55
RPN1-208ENST00000497415 A6NCN8 305 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 RHPN2P1A8MT19 583 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 TMX2-CTNND1H3BSU7 103 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 GAPDHSO14556 408 aaPredicted RBP18.46■□□□□ 0.55
RPN1-208ENST00000497415 PPM1DO15297 605 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 BUD23O43709 281 aaKnown RBP18.46■□□□□ 0.55
RPN1-208ENST00000497415 TLX3O43711 291 aaPredicted RBP18.46■□□□□ 0.55
RPN1-208ENST00000497415 NRDCO43847 1150 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 METTL18O95568 372 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 MPOP05164 745 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 LPOP22079 712 aaPredicted RBP18.46■□□□□ 0.55
RPN1-208ENST00000497415 GPR3P46089 330 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 FASLGP48023 281 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 GABREP78334 506 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 OASLQ15646 514 aaKnown RBP18.46■□□□□ 0.55
RPN1-208ENST00000497415 CHRNA6Q15825 494 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 TBC1D25Q3MII6 688 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 KHDC1Q4VXA5 237 aaKnown RBP18.46■□□□□ 0.55
RPN1-208ENST00000497415 ARHGEF18Q6ZSZ5 1173 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 SFRP1Q8N474 314 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 SNIP1Q8TAD8 396 aaKnown RBP18.46■□□□□ 0.55
RPN1-208ENST00000497415 BRSK1Q8TDC3 778 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 LIN37Q96GY3 246 aaPredicted RBP18.46■□□□□ 0.55
RPN1-208ENST00000497415 ALS2CR12Q96Q35 445 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 C19orf43Q9BQ61 176 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 TBL1YQ9BQ87 522 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 FEZ2Q9UHY8 353 aaPredicted RBP18.46■□□□□ 0.55
RPN1-208ENST00000497415 KCNK6Q9Y257 313 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 PCDHGA8Q9Y5G5 932 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 ARL5AQ9Y689 179 aa18.46■□□□□ 0.55
RPN1-208ENST00000497415 A0A087WV48 116 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms