RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 PAM16Q9Y3D7 125 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 MIA3Q5JRA6 1907 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 DOCK7Q96N67 2140 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 KMT2EQ8IZD2 1858 aa3.26□□□□□ -1.89
PTCD3-218ENST00000493430 ZNF638Q14966 1978 aaKnown RBP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 VWA8A3KMH1 1905 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 REV3LO60673 3130 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 DNAH12Q6ZR08 3092 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 OBSL1O75147 1896 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 DENND4AQ7Z401 1863 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 IGKV6D-41A0A0C4DH26 115 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 HMMRO75330 724 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 PARNO95453 639 aaKnown RBP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 VNN2O95498 520 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 CYBAP13498 195 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 RXRAP19793 462 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 ANOS1P23352 680 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 DGKAP23743 735 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 FMO4P31512 558 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 DCTDP32321 178 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 PSMC6P62333 389 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 UBXN2AP68543 259 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 DCAF6Q58WW2 860 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 IL31Q6EBC2 164 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 FAM109BQ6ICB4 259 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 SNRNP48Q6IEG0 339 aaKnown RBP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 KLHL17Q6TDP4 642 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 KLHL24Q6TFL4 600 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 UNQ6126/PRO20091Q6UXV3 157 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 STOX1Q6ZVD7 989 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 FASTKD5Q7L8L6 764 aaKnown RBP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 FBXO16Q8IX29 292 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 FAM186BQ8IYM0 893 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 FSIP1Q8NA03 581 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 ZNF527Q8NB42 609 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 SCAMP5Q8TAC9 235 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 SORCS1Q8WY21 1168 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 ATOH1Q92858 354 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 MTBPQ96DY7 904 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 SCMH1Q96GD3 660 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 TCEANC2Q96MN5 208 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 ZNF385AQ96PM9 386 aaKnown RBP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 UHRF2Q96PU4 802 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 SPATC1LQ9H0A9 340 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 MVB12BQ9H7P6 319 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 VCPKMTQ9H867 229 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 EVA1AQ9H8M9 152 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 CLIP2Q9UDT6 1046 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 CDC23Q9UJX2 597 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 PLIN4Q96Q06 1357 aa3.25□□□□□ -1.89
PTCD3-218ENST00000493430 MTCL1Q9Y4B5 1905 aaKnown RBP3.25□□□□□ -1.89
PTCD3-218ENST00000493430 MYO16Q9Y6X6 1858 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 SYNRGQ9UMZ2 1314 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 MYH10P35580 1976 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 hCG_1642624A0A1W2PR95 340 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 OR6C68A6NDL8 312 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 LGALS16A8MUM7 142 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 FAM157AC9JC47 383 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 TIMM23O14925 209 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 RANBP6O60518 1105 aaKnown RBP3.24□□□□□ -1.89
PTCD3-218ENST00000493430 CBX6O95503 412 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 IL1AP01583 271 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 AFPP02771 609 aaKnown RBP3.24□□□□□ -1.89
PTCD3-218ENST00000493430 CYP21A2P08686 494 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 DHRS4L1P0CG22 281 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 ARSAP15289 507 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 MCCP23508 829 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 GLIPR1P48060 266 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 TFAP4Q01664 338 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 TROAPQ12815 778 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 DHX34Q14147 1143 aaKnown RBP3.24□□□□□ -1.89
PTCD3-218ENST00000493430 GRB14Q14449 540 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 CCDC6Q16204 474 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 PKN2Q16513 984 aaKnown RBP3.24□□□□□ -1.89
PTCD3-218ENST00000493430 CALCRLQ16602 461 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 PFKFB4Q16877 469 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 CCDC96Q2M329 555 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 USH1GQ495M9 461 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 MAP3K21Q5TCX8 1036 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 PGBD2Q6P3X8 592 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 CWC27Q6UX04 472 aaKnown RBP3.24□□□□□ -1.89
PTCD3-218ENST00000493430 GDPD4Q6W3E5 623 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 SYNE3Q6ZMZ3 975 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 TMEM179Q6ZVK1 233 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 TUBA1AQ71U36 451 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 TMCO2Q7Z6W1 182 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-218ENST00000493430 SMIM29Q86T20 159 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 GPRC5AQ8NFJ5 357 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 RFWD2Q8NHY2 731 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 C12orf42Q96LP6 360 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 TUBA1CQ9BQE3 449 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 LRRC2Q9BYS8 371 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 NAPBQ9H115 298 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 PABPC3Q9H361 631 aaKnown RBP3.24□□□□□ -1.89
PTCD3-218ENST00000493430 PRO3102Q9H379 93 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 UBTD1Q9HAC8 227 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 ZCCHC17Q9NP64 241 aaKnown RBP3.24□□□□□ -1.89
PTCD3-218ENST00000493430 THAP1Q9NVV9 213 aa3.24□□□□□ -1.89
PTCD3-218ENST00000493430 ZHX1Q9UKY1 873 aaPredicted RBP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms