RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 RPLP0P05388 317 aaKnown RBP13.38□□□□□ -0.27
LMO4-203ENST00000489303 GPR89BP0CG08 455 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 AK4P27144 223 aaPredicted RBP13.38□□□□□ -0.27
LMO4-203ENST00000489303 HMGCLP35914 325 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 HLTFQ14527 1009 aaKnown RBP eCLIP13.38□□□□□ -0.27
LMO4-203ENST00000489303 ISXQ2M1V0 245 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 CERCAMQ5T4B2 595 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 PCSK4Q6UW60 755 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 ARHGEF18Q6ZSZ5 1173 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 NRROSQ86YC3 692 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 PHYKPLQ8IUZ5 450 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 CCNJLQ8IV13 435 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 LRRC8AQ8IWT6 810 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 SNIP1Q8TAD8 396 aaKnown RBP13.38□□□□□ -0.27
LMO4-203ENST00000489303 GLYATL1Q969I3 302 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 EID2BQ96D98 161 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 PLEKHG4BQ96PX9 1271 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 FICDQ9BVA6 458 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 CARD9Q9H257 536 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 LRRN3Q9H3W5 708 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 SPATS2LQ9NUQ6 558 aaKnown RBP13.38□□□□□ -0.27
LMO4-203ENST00000489303 APPL1Q9UKG1 709 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 CNOT6Q9ULM6 557 aaKnown RBP13.38□□□□□ -0.27
LMO4-203ENST00000489303 PKP3Q9Y446 797 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 SPO11Q9Y5K1 396 aa13.38□□□□□ -0.27
LMO4-203ENST00000489303 C2orf81A6NN90 581 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 GRID2O43424 1007 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 PPFIA2O75334 1257 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 SLC2A4P14672 509 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 BPIP17213 487 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 PSMB4P28070 264 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 ACTN2P35609 894 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 SPAM1P38567 509 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 CHRNA4P43681 627 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 CCL7P80098 99 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 TLE3Q04726 772 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 RPS6KA1Q15418 735 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 TBC1D25Q3MII6 688 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 CHST15Q7LFX5 561 aaPredicted RBP13.37□□□□□ -0.27
LMO4-203ENST00000489303 SPACA3Q8IXA5 215 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 Q8N9G6 341 aaPredicted RBP13.37□□□□□ -0.27
LMO4-203ENST00000489303 GDAP1Q8TB36 358 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 CCDC110Q8TBZ0 833 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 PTCD2Q8WV60 388 aaKnown RBP13.37□□□□□ -0.27
LMO4-203ENST00000489303 FGF11Q92914 225 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 FCRL3Q96P31 734 aaPredicted RBP13.37□□□□□ -0.27
LMO4-203ENST00000489303 FRMD8P1Q9BZ68 369 aaPredicted RBP13.37□□□□□ -0.27
LMO4-203ENST00000489303 STRADBQ9C0K7 418 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 STN1Q9H668 368 aaKnown RBP13.37□□□□□ -0.27
LMO4-203ENST00000489303 POLR1BQ9H9Y6 1135 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 TRIM39Q9HCM9 518 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 BPIFA1Q9NP55 256 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 LZTFL1Q9NQ48 299 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 OAS3Q9Y6K5 1087 aaKnown RBP13.37□□□□□ -0.27
LMO4-203ENST00000489303 RNF215Q9Y6U7 377 aa13.37□□□□□ -0.27
LMO4-203ENST00000489303 GCN1Q92616 2671 aaKnown RBP13.37□□□□□ -0.27
LMO4-203ENST00000489303 PTPRQQ9UMZ3 2332 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 C5orf60A6NFR6 353 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 NTN3O00634 580 aaPredicted RBP13.36□□□□□ -0.27
LMO4-203ENST00000489303 AURKAO14965 403 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 STX7O15400 261 aaKnown RBP13.36□□□□□ -0.27
LMO4-203ENST00000489303 NUAK1O60285 661 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 DNAJC6O75061 913 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 ECEL1O95672 775 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 AGTP01019 485 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 LSSP48449 732 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 MAZP56270 477 aaKnown RBP13.36□□□□□ -0.27
LMO4-203ENST00000489303 GABREP78334 506 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 PDE1BQ01064 536 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 KLF1Q13351 362 aaPredicted RBP13.36□□□□□ -0.27
LMO4-203ENST00000489303 ITGA9Q13797 1035 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 GTF2H3Q13889 308 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 PARP6Q2NL67 630 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 P3H1Q32P28 736 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 LRRC69Q6ZNQ3 347 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 ZNF662Q6ZS27 426 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 ARL14Q8N4G2 192 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 FAM71DQ8N9W8 422 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 DTX3LQ8TDB6 740 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 BRSK1Q8TDC3 778 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 TTC25Q96NG3 672 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 TMEM74Q96NL1 305 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 OR2AG1Q9H205 316 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 ATXN10Q9UBB4 475 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 FEZ2Q9UHY8 353 aaPredicted RBP13.36□□□□□ -0.27
LMO4-203ENST00000489303 PRKAB1Q9Y478 270 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 PLEKHM1Q9Y4G2 1056 aa13.36□□□□□ -0.27
LMO4-203ENST00000489303 MGAQ8IWI9 3026 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 GLYATL1P3A0A0U1RQE8 302 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 RRP8O43159 456 aaKnown RBP13.35□□□□□ -0.27
LMO4-203ENST00000489303 PSMD3O43242 534 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 VEGFDO43915 354 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 CDK14O94921 469 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 CRTAMO95727 393 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 ACP5P13686 325 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 RBMS1P29558 406 aaKnown RBP13.35□□□□□ -0.27
LMO4-203ENST00000489303 ALDH4A1P30038 563 aa13.35□□□□□ -0.27
LMO4-203ENST00000489303 STIP1P31948 543 aaKnown RBP13.35□□□□□ -0.27
LMO4-203ENST00000489303 PPM1FP49593 454 aaPredicted RBP13.35□□□□□ -0.27
LMO4-203ENST00000489303 CXADRP78310 365 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms