RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 IGSF10Q6WRI0 2623 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 TJP3O95049 919 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 RBMS1P29558 406 aaKnown RBP17.57■□□□□ 0.4
ITGB1-215ENST00000488494 CETN2P41208 172 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 MPP3Q13368 585 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 SLC1A5Q15758 541 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 AMZ1Q400G9 498 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 PDPK2PQ6A1A2 396 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 ITPRIPL1Q6GPH6 555 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 CRTC3Q6UUV7 619 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 CHST15Q7LFX5 561 aaPredicted RBP17.57■□□□□ 0.4
ITGB1-215ENST00000488494 PDZD3Q86UT5 571 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 SYCE1Q8N0S2 351 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 UBL4BQ8N7F7 174 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 WDR36Q8NI36 951 aaKnown RBP17.57■□□□□ 0.4
ITGB1-215ENST00000488494 BLOC1S5Q8TDH9 187 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 GLYATL1Q969I3 302 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 NAF1Q96HR8 494 aaKnown RBP17.57■□□□□ 0.4
ITGB1-215ENST00000488494 TMEM74Q96NL1 305 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 FERMT1Q9BQL6 677 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 GORASP1Q9BQQ3 440 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 FICDQ9BVA6 458 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 STRADBQ9C0K7 418 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 RMI1Q9H9A7 625 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 ATXN10Q9UBB4 475 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 AMFRQ9UKV5 643 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 PCDHGA8Q9Y5G5 932 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 CAPN6Q9Y6Q1 641 aa17.57■□□□□ 0.4
ITGB1-215ENST00000488494 MIF4GDA9UHW6 222 aaKnown RBP17.56■□□□□ 0.4
ITGB1-215ENST00000488494 KCNN4O15554 427 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 NUAK1O60285 661 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 STK10O94804 968 aaKnown RBP17.56■□□□□ 0.4
ITGB1-215ENST00000488494 SLC25A14O95258 325 aaPredicted RBP17.56■□□□□ 0.4
ITGB1-215ENST00000488494 EML2O95834 649 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 EPOP01588 193 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 PTMAP06454 111 aaKnown RBP17.56■□□□□ 0.4
ITGB1-215ENST00000488494 RBP3P10745 1247 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 ZNF8P17098 575 aaPredicted RBP17.56■□□□□ 0.4
ITGB1-215ENST00000488494 HLA-DPA1P20036 260 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 ALDH4A1P30038 563 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 CCKBRP32239 447 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 OR1D5P58170 312 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 ERVPABLB-1P60509 514 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 B4GALNT1Q00973 533 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 NR1D2Q14995 579 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 DARS2Q6PI48 645 aaKnown RBP17.56■□□□□ 0.4
ITGB1-215ENST00000488494 IGF2-ASQ6U949 168 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 TMPRSS9Q7Z410 1059 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 GLT6D1Q7Z4J2 308 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 TTC30BQ8N4P2 665 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 SLC37A2Q8TED4 501 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 PRR11Q96HE9 360 aaPredicted RBP17.56■□□□□ 0.4
ITGB1-215ENST00000488494 SLC46A1Q96NT5 459 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 PLEKHG4BQ96PX9 1271 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 CARD9Q9H257 536 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 TRABDQ9H4I3 376 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 RDH14Q9HBH5 336 aa17.56■□□□□ 0.4
ITGB1-215ENST00000488494 URB1O60287 2271 aaKnown RBP17.55■□□□□ 0.4
ITGB1-215ENST00000488494 TMX2-CTNND1H3BSU7 103 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 AGRPO00253 132 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 GRID2O43424 1007 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 MTX2O75431 263 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 ANXA9O76027 345 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 TNFSF15O95150 251 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 PSMB4P28070 264 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 HMGCLP35914 325 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 GEMP55040 296 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 PLA2G4EQ3MJ16 856 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 RAB11FIP2Q7L804 512 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 ADGRG6Q86SQ4 1221 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 SLITRK4Q8IW52 837 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 SPACA3Q8IXA5 215 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 ZNF248Q8NDW4 579 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 HACD3Q9P035 362 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 TBC1D29Q9UFV1 150 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 ADGRG1Q9Y653 693 aa17.55■□□□□ 0.4
ITGB1-215ENST00000488494 ARHGEF17Q96PE2 2063 aaPredicted RBP17.55■□□□□ 0.4
ITGB1-215ENST00000488494 PLD2O14939 933 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 PPM1DO15297 605 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 DDX3YO15523 660 aaKnown RBP17.54■□□□□ 0.4
ITGB1-215ENST00000488494 GPR39O43194 453 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 B4GAT1O43505 415 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 BUD23O43709 281 aaKnown RBP17.54■□□□□ 0.4
ITGB1-215ENST00000488494 SNX2O60749 519 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 AGTP01019 485 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 ITGA2BP08514 1039 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 HGFP14210 728 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 GSDMDP57764 484 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 TLE3Q04726 772 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 ZFP36L1Q07352 338 aaKnown RBP17.54■□□□□ 0.4
ITGB1-215ENST00000488494 EIF3IQ13347 325 aaKnown RBP17.54■□□□□ 0.4
ITGB1-215ENST00000488494 OLIG2Q13516 323 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 KHDC1Q4VXA5 237 aaKnown RBP17.54■□□□□ 0.4
ITGB1-215ENST00000488494 ANKRD20A2Q5SQ80 823 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 PHF19Q5T6S3 580 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 ANKRD20A1Q5TYW2 823 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 ANKRD20A3Q5VUR7 823 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 FAM151BQ6UXP7 276 aa17.54■□□□□ 0.4
ITGB1-215ENST00000488494 ZNF761Q86XN6 746 aaPredicted RBP17.54■□□□□ 0.4
ITGB1-215ENST00000488494 SFRP1Q8N474 314 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms